RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 C1orf134Q5TEV5 83 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 STX12Q86Y82 276 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 NUP35Q8NFH5 326 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 MUCL1Q96DR8 90 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 GGACTQ9BVM4 153 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 FER1L6Q2WGJ9 1857 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 ROCK2O75116 1388 aaKnown RBP1.58□□□□□ -2.16
PRKDC-208ENST00000536710 KTN1Q86UP2 1357 aaKnown RBP1.58□□□□□ -2.16
PRKDC-208ENST00000536710 ANKRD36BQ8N2N9 1353 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 DLG5Q8TDM6 1919 aa1.58□□□□□ -2.16
PRKDC-208ENST00000536710 MRC1P22897 1456 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 MED12LQ86YW9 2145 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 TRBV6-4A0A1B0GX49 114 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 OR2T8A6NH00 312 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 PPP5D1E7EU14 171 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 RER1O15258 196 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 CCL25O15444 150 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 VBP1P61758 197 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 FKBP1CQ5VVH2 108 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 C1orf140Q5VVS0 124 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 PLEKHB2Q96CS7 222 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 V9GYQ6 96 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 LAMB4A4D0S4 1761 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 LAMB1P07942 1786 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 NSD3Q9BZ95 1437 aa1.57□□□□□ -2.16
PRKDC-208ENST00000536710 KCPQ6ZWJ8 1503 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 HIST1H2BKO60814 126 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 HIST1H2BJP06899 126 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 RTL8BQ17RB0 113 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 SPRNQ5BIV9 151 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 ZNF833PQ6ZTB9 187 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 GKN2Q86XP6 184 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 ZNF431Q8TF32 576 aaPredicted RBP1.56□□□□□ -2.16
PRKDC-208ENST00000536710 RTL8AQ9BWD3 113 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 PCBD2Q9H0N5 130 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 OR52A1Q9UKL2 312 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 ANKRD36CQ5JPF3 1778 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 KDM3BQ7LBC6 1761 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 NUP98P52948 1817 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 OBSL1O75147 1896 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 KDM6AO15550 1401 aaPredicted RBP1.56□□□□□ -2.16
PRKDC-208ENST00000536710 C10orf71Q711Q0 1435 aa1.56□□□□□ -2.16
PRKDC-208ENST00000536710 HTTP42858 3142 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 DIDO1Q9BTC0 2240 aaKnown RBP1.55□□□□□ -2.16
PRKDC-208ENST00000536710 PSME4Q14997 1843 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 F8W1H4 67 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 DCUN1D2Q6PH85 259 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 TEN1Q86WV5 123 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 LINC00052Q96N35 136 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 LAMTOR3Q9UHA4 124 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 CENPFP49454 3210 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 BRCA2P51587 3418 aa1.55□□□□□ -2.16
PRKDC-208ENST00000536710 LRRC37AA6NMS7 1700 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 TRAV5A0A0B4J249 113 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 IGHV1-58A0A0C4DH39 117 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 MAP1LC3B2A6NCE7 125 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 GPR31O00270 319 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 CST7O76096 145 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 FABP1P07148 127 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 CXCL8P10145 99 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 HBBP68871 147 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 Q8TAT8 98 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 HYLS1Q96M11 299 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 MKI67P46013 3256 aaKnown RBP1.54□□□□□ -2.16
PRKDC-208ENST00000536710 DDX60Q8IY21 1712 aaKnown RBP1.54□□□□□ -2.16
PRKDC-208ENST00000536710 A0A1B0GUL6 1792 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 TRPM7Q96QT4 1865 aa1.54□□□□□ -2.16
PRKDC-208ENST00000536710 KLF7O75840 302 aaPredicted RBP1.53□□□□□ -2.16
PRKDC-208ENST00000536710 IGLV1-51P01701 117 aa1.53□□□□□ -2.16
PRKDC-208ENST00000536710 LRRC18Q8N456 261 aa1.53□□□□□ -2.16
PRKDC-208ENST00000536710 BORCS8Q96FH0 119 aa1.53□□□□□ -2.16
PRKDC-208ENST00000536710 RNF11Q9Y3C5 154 aa1.53□□□□□ -2.16
PRKDC-208ENST00000536710 PAPPA2Q9BXP8 1791 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 DUOX1Q9NRD9 1551 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 H3BQV1 296 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 H3BRM9 83 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 NUPR1O60356 82 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 PFDN1O60925 122 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 EIF3IQ13347 325 aaKnown RBP1.52□□□□□ -2.17
PRKDC-208ENST00000536710 LINC00322Q6ZN03 302 aaPredicted RBP1.52□□□□□ -2.17
PRKDC-208ENST00000536710 SMIM5Q71RC9 77 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 SELENOSQ9BQE4 189 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 OR2H1Q9GZK4 316 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 ASB4Q9Y574 426 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 MYH3P11055 1940 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 DENND4CQ5VZ89 1909 aa1.52□□□□□ -2.17
PRKDC-208ENST00000536710 RBBP6Q7Z6E9 1792 aaKnown RBP1.52□□□□□ -2.17
PRKDC-208ENST00000536710 SCN8AQ9UQD0 1980 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.51□□□□□ -2.17
PRKDC-208ENST00000536710 TRAV27A0A087WT01 109 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 LYRM1O43325 122 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 MT-ND6P03923 174 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 RPL35P42766 123 aaKnown RBP1.51□□□□□ -2.17
PRKDC-208ENST00000536710 TMEM138Q9NPI0 162 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 SPEF2Q9C093 1822 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 CACNA1BQ00975 2339 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 ARAP2Q8WZ64 1704 aa1.51□□□□□ -2.17
PRKDC-208ENST00000536710 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms