RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 C20orf144Q9BQM9 153 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 DKK2Q9UBU2 259 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 SLC25A5P05141 298 aaKnown RBP12.83□□□□□ -0.36
CCDC61-201ENST00000536603 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
CCDC61-201ENST00000536603 RPH3ALQ9UNE2 315 aa12.83□□□□□ -0.36
CCDC61-201ENST00000536603 RBAKDNA6NC62 111 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 C11orf94C9JXX5 98 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 GPX1P07203 203 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 ZNF138P52744 262 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 Q8TAT8 98 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 ARL2-SNX15V9GYD0 113 aa12.82□□□□□ -0.36
CCDC61-201ENST00000536603 C7orf71A4D174 169 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 KLLNB2CW77 178 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 BCL2P10415 239 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 CRISP2P16562 243 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 RNASE4P34096 147 aaKnown RBP12.81□□□□□ -0.36
CCDC61-201ENST00000536603 BTN1A1Q13410 526 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 C2CD4CQ8TF44 421 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 MANBALQ9NQG1 85 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
CCDC61-201ENST00000536603 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
CCDC61-201ENST00000536603 TEX48A0A1B0GUV7 120 aa12.8□□□□□ -0.36
CCDC61-201ENST00000536603 PPT1P50897 306 aa12.8□□□□□ -0.36
CCDC61-201ENST00000536603 ZFAND2AQ8N6M9 145 aa12.8□□□□□ -0.36
CCDC61-201ENST00000536603 C5orf17Q8NAS9 161 aa12.8□□□□□ -0.36
CCDC61-201ENST00000536603 C16orf74Q96GX8 76 aa12.8□□□□□ -0.36
CCDC61-201ENST00000536603 PLAC8L1A1L4L8 177 aa12.79□□□□□ -0.36
CCDC61-201ENST00000536603 ZNF324O75467 553 aaPredicted RBP12.79□□□□□ -0.36
CCDC61-201ENST00000536603 RAB14P61106 215 aa12.79□□□□□ -0.36
CCDC61-201ENST00000536603 PRR9Q5T870 116 aa12.79□□□□□ -0.36
CCDC61-201ENST00000536603 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
CCDC61-201ENST00000536603 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
CCDC61-201ENST00000536603 DEFB131BA0A096LNP1 70 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 RBFOX3A6NFN3 312 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 IGLL5B9A064 214 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 TCRAP04437 139 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 SRSF3P84103 164 aaKnown RBP12.78□□□□□ -0.36
CCDC61-201ENST00000536603 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 ZNF506Q5JVG8 444 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 ZNF493Q6ZR52 646 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 ARL6IP6Q8N6S5 226 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 RNASE8Q8TDE3 154 aaKnown RBP12.78□□□□□ -0.36
CCDC61-201ENST00000536603 TMEM263Q8WUH6 116 aaKnown RBP12.78□□□□□ -0.36
CCDC61-201ENST00000536603 LINC00479Q96M42 142 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 PYGO2Q9BRQ0 406 aa12.78□□□□□ -0.36
CCDC61-201ENST00000536603 TRAV8-1A0A0A6YYK1 113 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 SCO2A0A1W2PP80 73 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 LYRM9A8MSI8 78 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 IFNA1P01562 189 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 DAD1P61803 113 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 Q6ZQT7 251 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 NKX6-2Q9C056 277 aaPredicted RBP12.77□□□□□ -0.37
CCDC61-201ENST00000536603 VAX2Q9UIW0 290 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 HERC2O95714 4834 aa12.77□□□□□ -0.37
CCDC61-201ENST00000536603 C9JQL5 133 aa12.76□□□□□ -0.37
CCDC61-201ENST00000536603 PEX7O00628 323 aa12.76□□□□□ -0.37
CCDC61-201ENST00000536603 IGLV2-11P01706 119 aa12.76□□□□□ -0.37
CCDC61-201ENST00000536603 MEF2BQ02080 365 aaPredicted RBP12.76□□□□□ -0.37
CCDC61-201ENST00000536603 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
CCDC61-201ENST00000536603 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
CCDC61-201ENST00000536603 LENEPQ9Y5L5 61 aa12.76□□□□□ -0.37
CCDC61-201ENST00000536603 TRAV34A0A0B4J273 112 aa12.75□□□□□ -0.37
CCDC61-201ENST00000536603 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
CCDC61-201ENST00000536603 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
CCDC61-201ENST00000536603 TCTAP57738 103 aa12.75□□□□□ -0.37
CCDC61-201ENST00000536603 NOP10Q9NPE3 64 aaKnown RBP12.75□□□□□ -0.37
CCDC61-201ENST00000536603 HTN3P15516 51 aa12.74□□□□□ -0.37
CCDC61-201ENST00000536603 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
CCDC61-201ENST00000536603 CYB561D1Q8N8Q1 229 aa12.74□□□□□ -0.37
CCDC61-201ENST00000536603 HIST1H2BAQ96A08 127 aa12.74□□□□□ -0.37
CCDC61-201ENST00000536603 C11orf52Q96A22 123 aa12.74□□□□□ -0.37
CCDC61-201ENST00000536603 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
CCDC61-201ENST00000536603 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
CCDC61-201ENST00000536603 CBY3A6NI87 242 aa12.73□□□□□ -0.37
CCDC61-201ENST00000536603 SNURFLB1AK76 121 aa12.73□□□□□ -0.37
CCDC61-201ENST00000536603 TVP23CQ96ET8 276 aa12.73□□□□□ -0.37
CCDC61-201ENST00000536603 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
CCDC61-201ENST00000536603 DERL1Q9BUN8 251 aa12.73□□□□□ -0.37
CCDC61-201ENST00000536603 EIF5A2Q9GZV4 153 aaKnown RBP12.73□□□□□ -0.37
CCDC61-201ENST00000536603 APLNQ9ULZ1 77 aa12.73□□□□□ -0.37
CCDC61-201ENST00000536603 IGHV4-4A0A075B6R2 117 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 IGHV1OR15-1A0A075B7D0 117 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 K7EQM0 130 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 TAGLN2P37802 199 aaKnown RBP12.72□□□□□ -0.37
CCDC61-201ENST00000536603 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 TXNDC17Q9BRA2 123 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 TCEAL7Q9BRU2 100 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 TREM1Q9NP99 234 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
CCDC61-201ENST00000536603 SRP19P09132 144 aaKnown RBP12.71□□□□□ -0.37
CCDC61-201ENST00000536603 Q6AWC8 147 aa12.71□□□□□ -0.37
CCDC61-201ENST00000536603 TP53TG3Q9ULZ0 132 aa12.71□□□□□ -0.37
CCDC61-201ENST00000536603 PSG8Q9UQ74 426 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms