RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 DEFB121Q5J5C9 76 aa11.89□□□□□ -0.51
VAMP1-205ENST00000535927 NIPSNAP3BQ9BS92 247 aa11.89□□□□□ -0.51
VAMP1-205ENST00000535927 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 TMEM218A2RU14 115 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-205ENST00000535927 PFN1P07737 140 aaKnown RBP11.88□□□□□ -0.51
VAMP1-205ENST00000535927 SPINK13Q1W4C9 94 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 Q8TAT8 98 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 MRAPQ8TCY5 172 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 TVP23CQ96ET8 276 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 LINC00467Q9BRT7 94 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 DERL1Q9BUN8 251 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 GOLT1BQ9Y3E0 138 aa11.88□□□□□ -0.51
VAMP1-205ENST00000535927 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 C9JQL5 133 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 H7BYZ3 331 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 CRXO43186 299 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-205ENST00000535927 GIG44P09565 113 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-205ENST00000535927 SFTA3P0C7M3 94 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 PNRC1Q12796 327 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-205ENST00000535927 ZNF674Q2M3X9 581 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 FAM162BQ5T6X4 162 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 SGK494Q96LW2 274 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 NEU1Q99519 415 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 SEC11CQ9BY50 192 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 NAT8Q9UHE5 227 aa11.87□□□□□ -0.51
VAMP1-205ENST00000535927 M0R2Z0 102 aa11.86□□□□□ -0.51
VAMP1-205ENST00000535927 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
VAMP1-205ENST00000535927 CEBPGP53567 150 aa11.86□□□□□ -0.51
VAMP1-205ENST00000535927 CSNK1G2-AS1Q8NCQ2 148 aa11.86□□□□□ -0.51
VAMP1-205ENST00000535927 KCNS1Q96KK3 526 aa11.86□□□□□ -0.51
VAMP1-205ENST00000535927 PYGO2Q9BRQ0 406 aa11.86□□□□□ -0.51
VAMP1-205ENST00000535927 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
VAMP1-205ENST00000535927 NBEAL2Q6ZNJ1 2754 aa11.86□□□□□ -0.51
VAMP1-205ENST00000535927 KRBOX1C9JBD0 128 aa11.85□□□□□ -0.51
VAMP1-205ENST00000535927 GCGP01275 180 aa11.85□□□□□ -0.51
VAMP1-205ENST00000535927 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
VAMP1-205ENST00000535927 GFI1BQ5VTD9 330 aa11.85□□□□□ -0.51
VAMP1-205ENST00000535927 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
VAMP1-205ENST00000535927 RNF183Q96D59 192 aa11.85□□□□□ -0.51
VAMP1-205ENST00000535927 RCHY1Q96PM5 261 aa11.85□□□□□ -0.51
VAMP1-205ENST00000535927 TRBV20OR9-2A0A075B6H5 130 aa11.84□□□□□ -0.51
VAMP1-205ENST00000535927 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
VAMP1-205ENST00000535927 PRB2P02812 416 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-205ENST00000535927 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-205ENST00000535927 TDRG1Q3Y452 100 aa11.84□□□□□ -0.51
VAMP1-205ENST00000535927 ZNF705AQ6ZN79 300 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-205ENST00000535927 DAZAP1Q96EP5 407 aaKnown RBP11.84□□□□□ -0.51
VAMP1-205ENST00000535927 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
VAMP1-205ENST00000535927 SDF2L1Q9HCN8 221 aa11.84□□□□□ -0.51
VAMP1-205ENST00000535927 C10orf91Q5T1B1 145 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 FAM231DQ6ZW35 169 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 LINC01551Q86U37 167 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 ZC2HC1AQ96GY0 325 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 C8orf49Q96NF6 230 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 SPATA25Q9BR10 227 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 TMEM208Q9BTX3 173 aa11.83□□□□□ -0.52
VAMP1-205ENST00000535927 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 F8W036 122 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 SPRY2O43597 315 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 MGST1P10620 155 aaKnown RBP11.82□□□□□ -0.52
VAMP1-205ENST00000535927 FXYD7P58549 80 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 ANXA2RQ3ZCQ2 193 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 FAM159AQ6UWV7 190 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 LINC01587Q99440 93 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 TP53TG3Q9ULZ0 132 aa11.82□□□□□ -0.52
VAMP1-205ENST00000535927 TRAV12-2A0A075B6T6 113 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 XKRY2A2RUG3 117 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 B4DEV8 164 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 CXCL1P09341 107 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 PRB4P10163 310 aaPredicted RBP11.81□□□□□ -0.52
VAMP1-205ENST00000535927 RPS20P60866 119 aaKnown RBP11.81□□□□□ -0.52
VAMP1-205ENST00000535927 BTN1A1Q13410 526 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 C1orf158Q8N1D5 194 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 ZMAT4Q9H898 229 aa11.81□□□□□ -0.52
VAMP1-205ENST00000535927 CARHSP1Q9Y2V2 147 aaKnown RBP11.81□□□□□ -0.52
VAMP1-205ENST00000535927 DNAH3Q8TD57 4116 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 IGHV1OR15-1A0A075B7D0 117 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 TMEM189A5PLL7 270 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 C19orf71A6NCJ1 209 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 MIFP14174 115 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 LINC01559Q495D7 138 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 C15orf54Q8N8G6 183 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 OSTCQ9NRP0 149 aa11.8□□□□□ -0.52
VAMP1-205ENST00000535927 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 J3KRW8 73 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 SH2D1AO60880 128 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 P01737 135 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 CRIP1P50238 77 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
VAMP1-205ENST00000535927 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
VAMP1-205ENST00000535927 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 DNLZQ5SXM8 178 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 PRR9Q5T870 116 aa11.79□□□□□ -0.52
VAMP1-205ENST00000535927 PPP1R2P9O14990 202 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 KIR3DS1Q14943 382 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 DEFB135Q30KP9 77 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms