RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 TMEM75Q8N9X5 138 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 WIPF2Q8TF74 440 aaPredicted RBP10.07□□□□□ -0.8
SPG11-203ENST00000535302 K7EM74 188 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 EP300Q09472 2414 aaPredicted RBP10.07□□□□□ -0.8
SPG11-203ENST00000535302 TRBV24-1A0A075B6N3 115 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 TRBV6-6A0A0A6YYG2 114 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 ADCYAP1P18509 176 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 C8orf86Q6ZUL3 223 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 UBL5Q9BZL1 73 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 USF3Q68DE3 2245 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 IGHV2-70DA0A0C4DH43 119 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
SPG11-203ENST00000535302 EML6Q6ZMW3 1958 aa10.06□□□□□ -0.8
SPG11-203ENST00000535302 GNRH2O43555 120 aa10.06□□□□□ -0.8
SPG11-203ENST00000535302 MRPL51Q4U2R6 128 aaKnown RBP10.06□□□□□ -0.8
SPG11-203ENST00000535302 OVOL2Q9BRP0 275 aa10.06□□□□□ -0.8
SPG11-203ENST00000535302 DEFB4AO15263 64 aa10.06□□□□□ -0.8
SPG11-203ENST00000535302 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
SPG11-203ENST00000535302 FOXL2NBQ6ZUU3 175 aa10.06□□□□□ -0.8
SPG11-203ENST00000535302 BUB3O43684 328 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 CRYBA4P53673 196 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 PYY3Q5JQD4 70 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 C5orf38Q86SI9 138 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 C9JQL5 133 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 ZNF134P52741 427 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 NCKAP5O14513 1909 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 C14orf132Q9NPU4 83 aa10.05□□□□□ -0.8
SPG11-203ENST00000535302 EGR2P11161 476 aaPredicted RBP10.04□□□□□ -0.8
SPG11-203ENST00000535302 LOXP28300 417 aaPredicted RBP10.04□□□□□ -0.8
SPG11-203ENST00000535302 APOC4P55056 127 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 SPRNQ5BIV9 151 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 SHISA9B4DS77 424 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 CARD19Q96LW7 228 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 SDHAF1A6NFY7 115 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 H3BMG7 143 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 POLR3KQ9Y2Y1 108 aaPredicted RBP10.04□□□□□ -0.8
SPG11-203ENST00000535302 NDUFA4L2Q9NRX3 87 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 AMTNQ6UX39 209 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 TANC2Q9HCD6 1990 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 ZNF833PQ6ZTB9 187 aa10.04□□□□□ -0.8
SPG11-203ENST00000535302 FNDC1Q4ZHG4 1894 aaPredicted RBP10.03□□□□□ -0.8
SPG11-203ENST00000535302 TRBV20-1A0A075B6N2 111 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 IGHV1OR15-1A0A075B7D0 117 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 A8MWP6 167 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 CFHR4Q92496 578 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 NRGNQ92686 78 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 WFDC9Q8NEX5 89 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 RNF183Q96D59 192 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 TMEM14BQ9NUH8 114 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 IGLV3-9A0A075B6K5 115 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 FRMPD3Q5JV73 1810 aa10.03□□□□□ -0.8
SPG11-203ENST00000535302 A0A1B0GW64 132 aa10.02□□□□□ -0.8
SPG11-203ENST00000535302 IFITM1P13164 125 aa10.02□□□□□ -0.8
SPG11-203ENST00000535302 NCR3O14931 201 aa10.02□□□□□ -0.81
SPG11-203ENST00000535302 PFN1P07737 140 aaKnown RBP10.02□□□□□ -0.81
SPG11-203ENST00000535302 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
SPG11-203ENST00000535302 J3QKU1 62 aa10.02□□□□□ -0.81
SPG11-203ENST00000535302 LYPD1Q8N2G4 141 aa10.02□□□□□ -0.81
SPG11-203ENST00000535302 NPBQ8NG41 125 aa10.02□□□□□ -0.81
SPG11-203ENST00000535302 ZNF726P1Q15940 193 aa10.02□□□□□ -0.81
SPG11-203ENST00000535302 FAM215AQ9Y5M1 114 aa10.02□□□□□ -0.81
SPG11-203ENST00000535302 TNRC6BQ9UPQ9 1833 aaKnown RBP10.02□□□□□ -0.81
SPG11-203ENST00000535302 ETDBQ3ZM63 59 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 PRSS33Q8NF86 280 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 SLAQ13239 276 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 SVIPQ8NHG7 77 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 U3KQE9 123 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 TRBV19A0A075B6N1 114 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 E9PQ18 207 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 WT1-ASQ06250 92 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 FOXE3Q13461 319 aa10.01□□□□□ -0.81
SPG11-203ENST00000535302 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
SPG11-203ENST00000535302 WDR81Q562E7 1941 aa10□□□□□ -0.81
SPG11-203ENST00000535302 CDKN1BP46527 198 aa10□□□□□ -0.81
SPG11-203ENST00000535302 Q6ZVH6 145 aa10□□□□□ -0.81
SPG11-203ENST00000535302 LRCOL1A6NCL2 159 aa10□□□□□ -0.81
SPG11-203ENST00000535302 IGKV3D-7A0A0C4DH55 119 aa10□□□□□ -0.81
SPG11-203ENST00000535302 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
SPG11-203ENST00000535302 WT1P19544 449 aaPredicted RBP10□□□□□ -0.81
SPG11-203ENST00000535302 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
SPG11-203ENST00000535302 RLFQ13129 1914 aa10□□□□□ -0.81
SPG11-203ENST00000535302 IGHV4-59P01825 116 aa10□□□□□ -0.81
SPG11-203ENST00000535302 SLURP1P55000 103 aa10□□□□□ -0.81
SPG11-203ENST00000535302 CEND1Q8N111 149 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 DAND5Q8N907 189 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 IGHV4OR15-8A0A075B7B6 117 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 A0A087WW49 117 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 NPSP0C0P6 89 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 SEM1Q6ZVN7 128 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 Q8TCH9 128 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 ROS1P08922 2347 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms