RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
USF1-211ENST00000534633 RYR1P21817 5038 aa8.81□□□□□ -1
USF1-211ENST00000534633 MAP1LC3B2A6NCE7 125 aa8.81□□□□□ -1
USF1-211ENST00000534633 ZNF705GA8MUZ8 300 aaPredicted RBP8.81□□□□□ -1
USF1-211ENST00000534633 GGTLC3B5MD39 225 aa8.81□□□□□ -1
USF1-211ENST00000534633 CDKN1BP46527 198 aa8.81□□□□□ -1
USF1-211ENST00000534633 SUMO1P63165 101 aaKnown RBP8.81□□□□□ -1
USF1-211ENST00000534633 GNG5P63218 68 aa8.81□□□□□ -1
USF1-211ENST00000534633 EIF5AP63241 154 aaKnown RBP8.81□□□□□ -1
USF1-211ENST00000534633 Q6ZQT7 251 aa8.81□□□□□ -1
USF1-211ENST00000534633 FAM213BQ8TBF2 198 aa8.81□□□□□ -1
USF1-211ENST00000534633 LINC00477Q96M19 166 aa8.81□□□□□ -1
USF1-211ENST00000534633 ODF3Q96PU9 254 aa8.81□□□□□ -1
USF1-211ENST00000534633 MAP1LC3BQ9GZQ8 125 aa8.81□□□□□ -1
USF1-211ENST00000534633 TMEM167BQ9NRX6 74 aa8.81□□□□□ -1
USF1-211ENST00000534633 ZNF492Q9P255 531 aa8.81□□□□□ -1
USF1-211ENST00000534633 DEFB130BP0DP73 79 aa8.8□□□□□ -1
USF1-211ENST00000534633 DEFB130AP0DP74 79 aa8.8□□□□□ -1
USF1-211ENST00000534633 CCL20P78556 96 aa8.8□□□□□ -1
USF1-211ENST00000534633 PRR9Q5T870 116 aa8.8□□□□□ -1
USF1-211ENST00000534633 GFI1BQ5VTD9 330 aa8.8□□□□□ -1
USF1-211ENST00000534633 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
USF1-211ENST00000534633 ZFAND2AQ8N6M9 145 aa8.8□□□□□ -1
USF1-211ENST00000534633 RXFP4Q8TDU9 374 aa8.8□□□□□ -1
USF1-211ENST00000534633 TRAV8-1A0A0A6YYK1 113 aa8.79□□□□□ -1
USF1-211ENST00000534633 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
USF1-211ENST00000534633 A0A1W2PRE2 83 aa8.79□□□□□ -1
USF1-211ENST00000534633 PLAC8L1A1L4L8 177 aa8.79□□□□□ -1
USF1-211ENST00000534633 RBAKDNA6NC62 111 aa8.79□□□□□ -1
USF1-211ENST00000534633 FAM74A7A6NL05 159 aa8.79□□□□□ -1
USF1-211ENST00000534633 KLLNB2CW77 178 aa8.79□□□□□ -1
USF1-211ENST00000534633 F5H768 121 aa8.79□□□□□ -1
USF1-211ENST00000534633 J3KRW8 73 aa8.79□□□□□ -1
USF1-211ENST00000534633 ZNF324O75467 553 aaPredicted RBP8.79□□□□□ -1
USF1-211ENST00000534633 IGLV2-11P01706 119 aa8.79□□□□□ -1
USF1-211ENST00000534633 SLC25A5P05141 298 aaKnown RBP8.79□□□□□ -1
USF1-211ENST00000534633 ATP5G1P05496 136 aa8.79□□□□□ -1
USF1-211ENST00000534633 CRISP2P16562 243 aa8.79□□□□□ -1
USF1-211ENST00000534633 AZU1P20160 251 aa8.79□□□□□ -1
USF1-211ENST00000534633 ATP5G3P48201 142 aa8.79□□□□□ -1
USF1-211ENST00000534633 SULT1A2P50226 295 aa8.79□□□□□ -1
USF1-211ENST00000534633 ZNF138P52744 262 aa8.79□□□□□ -1
USF1-211ENST00000534633 UBE2G2P60604 165 aa8.79□□□□□ -1
USF1-211ENST00000534633 DPPA3Q6W0C5 159 aa8.79□□□□□ -1
USF1-211ENST00000534633 CCDC28AQ8IWP9 274 aa8.79□□□□□ -1
USF1-211ENST00000534633 IQCF2Q8IXL9 164 aa8.79□□□□□ -1
USF1-211ENST00000534633 C6orf223Q8N319 242 aa8.79□□□□□ -1
USF1-211ENST00000534633 ARL6IP6Q8N6S5 226 aa8.79□□□□□ -1
USF1-211ENST00000534633 ZNRF2Q8NHG8 242 aa8.79□□□□□ -1
USF1-211ENST00000534633 Q8TAT8 98 aa8.79□□□□□ -1
USF1-211ENST00000534633 SFT2D1Q8WV19 159 aa8.79□□□□□ -1
USF1-211ENST00000534633 TVP23CQ96ET8 276 aa8.79□□□□□ -1
USF1-211ENST00000534633 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
USF1-211ENST00000534633 PPP1R14DQ9NXH3 145 aa8.79□□□□□ -1
USF1-211ENST00000534633 CBY3A6NI87 242 aa8.78□□□□□ -1
USF1-211ENST00000534633 C16orf90A8MZG2 172 aa8.78□□□□□ -1
USF1-211ENST00000534633 NUDT3O95989 172 aa8.78□□□□□ -1
USF1-211ENST00000534633 TCRAP04437 139 aa8.78□□□□□ -1
USF1-211ENST00000534633 H2AFB1P0C5Y9 115 aa8.78□□□□□ -1
USF1-211ENST00000534633 CSN1S1P47710 185 aa8.78□□□□□ -1
USF1-211ENST00000534633 CCL18P55774 89 aa8.78□□□□□ -1
USF1-211ENST00000534633 TNP2Q05952 138 aa8.78□□□□□ -1
USF1-211ENST00000534633 FAM74A1Q5RGS3 127 aa8.78□□□□□ -1
USF1-211ENST00000534633 TMEM78Q5T7P6 136 aa8.78□□□□□ -1
USF1-211ENST00000534633 GOLT1AQ6ZVE7 132 aa8.78□□□□□ -1
USF1-211ENST00000534633 SGK494Q96LW2 274 aa8.78□□□□□ -1
USF1-211ENST00000534633 LINC00479Q96M42 142 aa8.78□□□□□ -1
USF1-211ENST00000534633 EPDR1Q9UM22 224 aa8.78□□□□□ -1
USF1-211ENST00000534633 TRAV12-3A0A0B4J271 114 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 A0A1B0GV50 99 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 NMBP08949 121 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 LEPP41159 167 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 TAS2R60P59551 318 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 BTN1A1Q13410 526 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 CMTM2Q8TAZ6 248 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 C16orf74Q96GX8 76 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 LINC01587Q99440 93 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 RPH3ALQ9UNE2 315 aa8.77□□□□□ -1.01
USF1-211ENST00000534633 TRAV1-1A0A0B4J248 108 aa8.76□□□□□ -1.01
USF1-211ENST00000534633 TRBV7-9A0A0J9YWB2 115 aa8.76□□□□□ -1.01
USF1-211ENST00000534633 RNASE4P34096 147 aaKnown RBP8.76□□□□□ -1.01
USF1-211ENST00000534633 RAB5CP51148 216 aa8.76□□□□□ -1.01
USF1-211ENST00000534633 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
USF1-211ENST00000534633 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
USF1-211ENST00000534633 TIMM8BQ9Y5J9 83 aaPredicted RBP8.76□□□□□ -1.01
USF1-211ENST00000534633 HSPG2P98160 4391 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 C7orf71A4D174 169 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 H7BYZ3 331 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 PAGE4O60829 102 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 GPX1P07203 203 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 ZNF493Q6ZR52 646 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 RNASE8Q8TDE3 154 aaKnown RBP8.75□□□□□ -1.01
USF1-211ENST00000534633 TMEM263Q8WUH6 116 aaKnown RBP8.75□□□□□ -1.01
USF1-211ENST00000534633 C20orf144Q9BQM9 153 aa8.75□□□□□ -1.01
USF1-211ENST00000534633 TRAV34A0A0B4J273 112 aa8.74□□□□□ -1.01
USF1-211ENST00000534633 HTN1P15515 57 aa8.74□□□□□ -1.01
USF1-211ENST00000534633 PSG8Q9UQ74 426 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms