RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 GAGE4Q13068 117 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 GAGE5Q13069 117 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 SMCO1Q147U7 214 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 GAGE13Q4V321 117 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 LINC00305Q7Z4B0 112 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 LHFPL1Q86WI0 220 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 STPG4Q8N801 248 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 GPX8Q8TED1 209 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 YIPF6Q96EC8 236 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 MRPL53Q96EL3 112 aaKnown RBP6.44□□□□□ -1.38
CSDE1-215ENST00000533818 LINC00479Q96M42 142 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 SMCO3A2RU48 225 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 PRSS46E5RG02 174 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 CIDEAO60543 219 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 CRPP02741 224 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 TCRBP04435 133 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 SMIM18P0DKX4 95 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 GUK1Q16774 197 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 TMEM78Q5T7P6 136 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 FAM159AQ6UWV7 190 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 PACRGLQ8N7B6 248 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 OR13C8Q8NGS7 320 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
CSDE1-215ENST00000533818 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 ATP5HO75947 161 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 AKR1C4P17516 323 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 CFAP126Q5VTH2 177 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 PRSS48Q7RTY5 328 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 ZNF546Q86UE3 836 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 NAA60Q9H7X0 242 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 AP5S1Q9NUS5 200 aa6.42□□□□□ -1.38
CSDE1-215ENST00000533818 IGKV2-40A0A087WW87 121 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-215ENST00000533818 IGKV2-24A0A0C4DH68 120 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 GNRH2O43555 120 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 IFNA7P01567 189 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 IGKV2D-40P01614 121 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-215ENST00000533818 SLPIP03973 132 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 MGST1P10620 155 aaKnown RBP6.41□□□□□ -1.38
CSDE1-215ENST00000533818 INPP1P49441 399 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 RPP30P78346 268 aaKnown RBP6.41□□□□□ -1.38
CSDE1-215ENST00000533818 COX6A2Q02221 97 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 MARCH1Q8TCQ1 289 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 C20orf85Q9H1P6 137 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 SDF2L1Q9HCN8 221 aa6.41□□□□□ -1.38
CSDE1-215ENST00000533818 LINC00694P0DN24 101 aa6.4□□□□□ -1.38
CSDE1-215ENST00000533818 HIST1H1EP10412 219 aaKnown RBP6.4□□□□□ -1.38
CSDE1-215ENST00000533818 SURF2Q15527 256 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-215ENST00000533818 ZNF876PQ49A33 203 aa6.4□□□□□ -1.38
CSDE1-215ENST00000533818 RNASE10Q5GAN6 216 aaKnown RBP6.4□□□□□ -1.38
CSDE1-215ENST00000533818 C15orf54Q8N8G6 183 aa6.4□□□□□ -1.38
CSDE1-215ENST00000533818 TERB2Q8NHR7 220 aa6.4□□□□□ -1.38
CSDE1-215ENST00000533818 ZNF492Q9P255 531 aa6.4□□□□□ -1.38
CSDE1-215ENST00000533818 NAGKQ9UJ70 344 aa6.4□□□□□ -1.38
CSDE1-215ENST00000533818 PRELID1Q9Y255 219 aa6.4□□□□□ -1.38
CSDE1-215ENST00000533818 TMEM262E9PQX1 116 aa6.39□□□□□ -1.39
CSDE1-215ENST00000533818 ZNF138P52744 262 aa6.39□□□□□ -1.39
CSDE1-215ENST00000533818 ZNF266Q14584 549 aa6.39□□□□□ -1.39
CSDE1-215ENST00000533818 UBE2NLQ5JXB2 153 aa6.39□□□□□ -1.39
CSDE1-215ENST00000533818 PXDC1Q5TGL8 231 aa6.39□□□□□ -1.39
CSDE1-215ENST00000533818 INO80EQ8NBZ0 244 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-215ENST00000533818 PRR13Q9NZ81 148 aa6.39□□□□□ -1.39
CSDE1-215ENST00000533818 C14orf166Q9Y224 244 aaKnown RBP6.39□□□□□ -1.39
CSDE1-215ENST00000533818 COX7A2P2O60397 106 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 MIAQ16674 131 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 SCGB2B2Q4G0G5 96 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 LYZL2Q7Z4W2 148 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 OR51S1Q8NGJ8 323 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 ATP5SQ99766 215 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 RTBDNQ9BSG5 229 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-215ENST00000533818 SLC39A9Q9NUM3 307 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 Q9UF83 564 aa6.38□□□□□ -1.39
CSDE1-215ENST00000533818 TRBV19A0A075B6N1 114 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 ANGP03950 147 aaKnown RBP6.37□□□□□ -1.39
CSDE1-215ENST00000533818 SPANXN5Q5MJ07 72 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 KRTAP26-1Q6PEX3 210 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 SNX29P2Q8IUI4 249 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 SAMD12Q8N8I0 201 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 PRSS3P2Q8NHM4 247 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 RAB2BQ8WUD1 216 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 NRG4Q8WWG1 115 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 TRIM63Q969Q1 353 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 CIB3Q96Q77 187 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-215ENST00000533818 SAMD10Q9BYL1 202 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
CSDE1-215ENST00000533818 IGLV1-50A0A075B6I6 118 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 A0A0B4J2A0 478 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 TRBV7-9A0A0J9YWB2 115 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 K7EPK0 472 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 WRBO00258 174 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 GOSR2O14653 212 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 NDUFS6O75380 124 aaKnown RBP6.36□□□□□ -1.39
CSDE1-215ENST00000533818 TSPAN13O95857 204 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 CD3DP04234 171 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 HOXB5P09067 269 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 FGF8P55075 233 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-215ENST00000533818 C10orf113Q5VZT2 155 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 Q6AWC8 147 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 EXOC3-AS1Q8N2X6 119 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 SHPKQ9UHJ6 478 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms