RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PSG9Q00887 426 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 PSG3Q16557 428 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 DEFB135Q30KP9 77 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 MIR17HGQ75NE6 70 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 TCTE3Q8IZS6 198 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 KCNRGQ8N5I3 272 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 PAXXQ9BUH6 204 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 SLC25A2Q9BXI2 301 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 OR51M1Q9H341 326 aa5.56□□□□□ -1.52
CASP4-212ENST00000533730 KANTRA0A1W2PQU2 76 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 A8MTW9 85 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 SMLR1H3BR10 107 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 CIDEAO60543 219 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 NBEAP1P0C6P0 100 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 XGP55808 180 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 RPL7L1Q6DKI1 246 aaKnown RBP5.55□□□□□ -1.52
CASP4-212ENST00000533730 AKAP14Q86UN6 197 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 LYPD1Q8N2G4 141 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 RNF182Q8N6D2 247 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 OR4B1Q8NGF8 309 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 OR10G4Q8NGN3 311 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 OR10G9Q8NGN4 311 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 OR10G7Q8NGN6 311 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 RPUSD4Q96CM3 377 aaKnown RBP5.55□□□□□ -1.52
CASP4-212ENST00000533730 FAM167A-AS1Q96KT0 104 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 FAM218AQ96MZ4 157 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 OVOL2Q9BRP0 275 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 ZNF586Q9NXT0 402 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
CASP4-212ENST00000533730 TRAV26-1A0A087WT03 109 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 FBLL1A6NHQ2 334 aaKnown RBP5.54□□□□□ -1.52
CASP4-212ENST00000533730 SLC17A3O00476 420 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 BCL2L11O43521 198 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 PFDN1O60925 122 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 PYYP10082 97 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 CDC34P49427 236 aaPredicted RBP5.54□□□□□ -1.52
CASP4-212ENST00000533730 RAB2AP61019 212 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 UBE2L3P68036 154 aaKnown RBP5.54□□□□□ -1.52
CASP4-212ENST00000533730 RIGQ13278 110 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 AKR1C8PQ5T2L2 129 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 GDF5OSQ5U4N7 250 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 NFE4Q86UQ8 179 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 OR8A1Q8NGG7 326 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 OR10J6PQ8NGY7 276 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 BLNKQ8WV28 456 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 HYLS1Q96M11 299 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 RARRES2Q99969 163 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 ACTR3CQ9C0K3 210 aaPredicted RBP5.54□□□□□ -1.52
CASP4-212ENST00000533730 RETNQ9HD89 108 aa5.54□□□□□ -1.52
CASP4-212ENST00000533730 F6UB75 175 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 IGKV3-20P01619 116 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 C1QBP02746 253 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 GIG44P09565 113 aaPredicted RBP5.53□□□□□ -1.52
CASP4-212ENST00000533730 OR10J4P0C629 311 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 CSN1S1P47710 185 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 HIST1H1AQ02539 215 aaPredicted RBP5.53□□□□□ -1.52
CASP4-212ENST00000533730 FAM74A1Q5RGS3 127 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 RPP25LQ8N5L8 163 aaKnown RBP5.53□□□□□ -1.52
CASP4-212ENST00000533730 OR11H2Q8NH07 326 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 FXYD5Q96DB9 178 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 ZNF471Q9BX82 626 aaPredicted RBP5.53□□□□□ -1.52
CASP4-212ENST00000533730 SH3BGRL3Q9H299 93 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 CYTL1Q9NRR1 136 aa5.53□□□□□ -1.52
CASP4-212ENST00000533730 CTXND1A0A1B0GTU2 59 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 SERTM2A0A1B0GWG4 89 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 ZNF705EA8MWA4 302 aaPredicted RBP5.52□□□□□ -1.53
CASP4-212ENST00000533730 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 CXorf1O96002 111 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 SNRPCP09234 159 aaKnown RBP5.52□□□□□ -1.53
CASP4-212ENST00000533730 SEC11BP0C7V7 166 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 STAG3L2P0CL84 134 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 STAG3L3P0CL85 134 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 MIFP14174 115 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 HLA-DMBP28068 263 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 TSPOP30536 169 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 DEFB1P60022 68 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 EIF5AL1Q6IS14 154 aaKnown RBP5.52□□□□□ -1.53
CASP4-212ENST00000533730 KCNIP4Q6PIL6 250 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 AMTNQ6UX39 209 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 TMUB2Q71RG4 321 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 CSNK1G2-AS1Q8NCQ2 148 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 RXFP4Q8TDU9 374 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 IGF2BP2-AS1Q96M15 143 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 ODF3Q96PU9 254 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 C11orf68Q9H3H3 251 aaKnown RBP5.52□□□□□ -1.53
CASP4-212ENST00000533730 EDA2RQ9HAV5 297 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 TMEM167BQ9NRX6 74 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 XCL2Q9UBD3 114 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 GOLT1BQ9Y3E0 138 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 RFNGQ9Y644 331 aa5.52□□□□□ -1.53
CASP4-212ENST00000533730 TGP01266 2768 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 ZNF705FA8MVS1 300 aaPredicted RBP5.51□□□□□ -1.53
CASP4-212ENST00000533730 C3orf84H3BNL1 204 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 INSP01308 110 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 ARL14EPLP0DKL9 152 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 TPT1P13693 172 aaKnown RBP5.51□□□□□ -1.53
CASP4-212ENST00000533730 GCHFRP30047 84 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 LEPP41159 167 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 SEC61GP60059 68 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms