RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
COMMD9-208ENST00000533643 NDFIP1Q9BT67 221 aa8.68□□□□□ -1.02
COMMD9-208ENST00000533643 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
COMMD9-208ENST00000533643 TRBV20OR9-2A0A075B6H5 130 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 TRAV12-3A0A0B4J271 114 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 C7orf71A4D174 169 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 RBMY1A1P0DJD3 496 aaKnown RBP8.67□□□□□ -1.02
COMMD9-208ENST00000533643 RBMY1CP0DJD4 496 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 BTN1A1Q13410 526 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 RBMY1FQ15415 496 aaKnown RBP8.67□□□□□ -1.02
COMMD9-208ENST00000533643 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 CENPWQ5EE01 88 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 Q6ZQT7 251 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 COX8CQ7Z4L0 72 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 B9D2Q9BPU9 175 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 MLST8Q9BVC4 326 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 PARLQ9H300 379 aa8.67□□□□□ -1.02
COMMD9-208ENST00000533643 HUWE1Q7Z6Z7 4374 aaKnown RBP8.66□□□□□ -1.02
COMMD9-208ENST00000533643 ZNF324O75467 553 aaPredicted RBP8.66□□□□□ -1.02
COMMD9-208ENST00000533643 INSP01308 110 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 IGLV2-8P01709 118 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 GNG4P50150 75 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 ZNF80P51504 273 aaPredicted RBP8.66□□□□□ -1.02
COMMD9-208ENST00000533643 ZNF674Q2M3X9 581 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 TMEM183AQ8IXX5 376 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 EIF4E3Q8N5X7 224 aaKnown RBP8.66□□□□□ -1.02
COMMD9-208ENST00000533643 NHLRC2Q8NBF2 726 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 RNF183Q96D59 192 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 ZC2HC1AQ96GY0 325 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
COMMD9-208ENST00000533643 PGPEP1LA6NFU8 196 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 C9JCJ5 164 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 SPRY2O43597 315 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 GCGP01275 180 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 CRIP1P50238 77 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 Q6AWC8 147 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 UQCC3Q6UW78 93 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 SMIM7Q9BQ49 75 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 TM2D3Q9BRN9 247 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 OVOL2Q9BRP0 275 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 RETNQ9HD89 108 aa8.65□□□□□ -1.02
COMMD9-208ENST00000533643 IGHV3OR16-12A0A075B7B8 117 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 SFTA3P0C7M3 94 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 SOHLH1Q5JUK2 328 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 ZNF705AQ6ZN79 300 aaPredicted RBP8.64□□□□□ -1.03
COMMD9-208ENST00000533643 LINC01587Q99440 93 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 NIPSNAP3BQ9BS92 247 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 TP53TG1Q9Y2A0 90 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 GOLT1BQ9Y3E0 138 aa8.64□□□□□ -1.03
COMMD9-208ENST00000533643 TRAV21A0A0B4J279 112 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 H7BYZ3 331 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 PRM2P04554 102 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 FAM74A3Q4VXF1 159 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 TMEM256Q8N2U0 113 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 OR11H2Q8NH07 326 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 SMIM12Q96EX1 92 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 TMEM208Q9BTX3 173 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
COMMD9-208ENST00000533643 FABP5P3A8MUU1 101 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 K7EN84 100 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 SH2D1AO60880 128 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 PFN1P07737 140 aaKnown RBP8.62□□□□□ -1.03
COMMD9-208ENST00000533643 MGST1P10620 155 aaKnown RBP8.62□□□□□ -1.03
COMMD9-208ENST00000533643 TMEM241Q24JQ0 296 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 FAM162BQ5T6X4 162 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 X6R8D5 127 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 TENM3Q9P273 2699 aa8.62□□□□□ -1.03
COMMD9-208ENST00000533643 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 IGHV1OR15-1A0A075B7D0 117 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 TMEM218A2RU14 115 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 ZNF705GA8MUZ8 300 aaPredicted RBP8.61□□□□□ -1.03
COMMD9-208ENST00000533643 OR5I1Q13606 314 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 MUC21Q5SSG8 566 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 PRR27Q6MZM9 219 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 NEU1Q99519 415 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 PYGO2Q9BRQ0 406 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 LINC00467Q9BRT7 94 aa8.61□□□□□ -1.03
COMMD9-208ENST00000533643 NHLRC4P0CG21 123 aaPredicted RBP8.6□□□□□ -1.03
COMMD9-208ENST00000533643 HTN1P15515 57 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 AZU1P20160 251 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 ANXA2RQ3ZCQ2 193 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 LINC01551Q86U37 167 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 SLC7A5P1Q8MH63 180 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 ZMAT4Q9H898 229 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 BIN3Q9NQY0 253 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 NAT8Q9UHE5 227 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 NAGKQ9UJ70 344 aa8.6□□□□□ -1.03
COMMD9-208ENST00000533643 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
COMMD9-208ENST00000533643 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
COMMD9-208ENST00000533643 ORM1P02763 201 aa8.59□□□□□ -1.03
COMMD9-208ENST00000533643 RPL23P62829 140 aaKnown RBP8.59□□□□□ -1.03
COMMD9-208ENST00000533643 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
COMMD9-208ENST00000533643 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms