RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 IGHG2P01859 326 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 MSMBP08118 114 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 FXYD7P58549 80 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 PET117Q6UWS5 81 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 GLMPQ8WWB7 406 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 RNF185Q96GF1 192 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 NPYP01303 97 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 IGHV3-11P01762 117 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 LCNL1Q6ZST4 164 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 OR10AG1Q8NH19 301 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 MRPS16Q9Y3D3 137 aaKnown RBP11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 CKS2P33552 79 aa11.71□□□□□ -0.53
CACNA1E-208ENST00000533229 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
CACNA1E-208ENST00000533229 C20orf173Q96LM9 149 aa11.71□□□□□ -0.53
CACNA1E-208ENST00000533229 TMEM191AQ9H0A3 160 aa11.71□□□□□ -0.53
CACNA1E-208ENST00000533229 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.54
CACNA1E-208ENST00000533229 LINC01545Q5VT33 79 aa11.71□□□□□ -0.54
CACNA1E-208ENST00000533229 PRSS57Q6UWY2 283 aa11.71□□□□□ -0.54
CACNA1E-208ENST00000533229 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.54
CACNA1E-208ENST00000533229 C9orf47Q6ZRZ4 202 aa11.7□□□□□ -0.54
CACNA1E-208ENST00000533229 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
CACNA1E-208ENST00000533229 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
CACNA1E-208ENST00000533229 CCL25O15444 150 aa11.69□□□□□ -0.54
CACNA1E-208ENST00000533229 FOXE3Q13461 319 aa11.69□□□□□ -0.54
CACNA1E-208ENST00000533229 ACACBO00763 2458 aa11.69□□□□□ -0.54
CACNA1E-208ENST00000533229 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
CACNA1E-208ENST00000533229 DEFB1P60022 68 aa11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 PRR9Q5T870 116 aa11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 ORAOV1Q8WV07 137 aa11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 IGHV7-4-1A0A0J9YVY3 117 aa11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 NDUFA4O00483 81 aa11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 PF4V1P10720 104 aa11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 HIST1H1AQ02539 215 aaPredicted RBP11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 PPP1R14DQ9NXH3 145 aa11.68□□□□□ -0.54
CACNA1E-208ENST00000533229 FBN2P35556 2912 aa11.67□□□□□ -0.54
CACNA1E-208ENST00000533229 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
CACNA1E-208ENST00000533229 SELENOKQ9Y6D0 94 aa11.67□□□□□ -0.54
CACNA1E-208ENST00000533229 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
CACNA1E-208ENST00000533229 MYO18BQ8IUG5 2567 aa11.67□□□□□ -0.54
CACNA1E-208ENST00000533229 SOCS3O14543 225 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 BRI3O95415 125 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 OR4X2Q8NGF9 303 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 B4DSR2 109 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 IGLV1-40P01703 118 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 EVI2AP22794 236 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 SCRT2Q9NQ03 307 aa11.66□□□□□ -0.54
CACNA1E-208ENST00000533229 H3BUA1 57 aa11.65□□□□□ -0.54
CACNA1E-208ENST00000533229 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
CACNA1E-208ENST00000533229 SPOCK3Q9BQ16 436 aa11.65□□□□□ -0.54
CACNA1E-208ENST00000533229 HSBP1L1C9JCN9 74 aa11.65□□□□□ -0.55
CACNA1E-208ENST00000533229 J3KRW8 73 aa11.65□□□□□ -0.55
CACNA1E-208ENST00000533229 PRB1P04280 392 aa11.65□□□□□ -0.55
CACNA1E-208ENST00000533229 PTTG1IPP53801 180 aa11.65□□□□□ -0.55
CACNA1E-208ENST00000533229 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.55
CACNA1E-208ENST00000533229 ERASQ7Z444 233 aa11.65□□□□□ -0.55
CACNA1E-208ENST00000533229 ZFYVE26Q68DK2 2539 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 TMEM8BA6NDV4 472 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 HBDP02042 147 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 EDN2P20800 178 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 CFHR3Q02985 330 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 NPFFR1Q9GZQ6 430 aa11.64□□□□□ -0.55
CACNA1E-208ENST00000533229 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 MPV17L2Q567V2 206 aa11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 F6UB75 175 aa11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 PPBPP02775 128 aa11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 ZFAND2AQ8N6M9 145 aa11.63□□□□□ -0.55
CACNA1E-208ENST00000533229 RPL11P62913 178 aaKnown RBP11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 MAPK1IP1LQ8NDC0 245 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 RNASE8Q8TDE3 154 aaKnown RBP11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 RHPN1-AS1Q9BWJ2 59 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 MS4A6AQ9H2W1 248 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 MAP1LC3AQ9H492 121 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 CSPG4Q6UVK1 2322 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 SPRY2O43597 315 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 IGHV4-59P01825 116 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 CACNG7P62955 275 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 UBE2V1Q13404 147 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 C10orf99Q6UWK7 81 aa11.62□□□□□ -0.55
CACNA1E-208ENST00000533229 POLQO75417 2590 aa11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 LINC01546A6NGU7 62 aa11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 KIR3DS1Q14943 382 aa11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 C21orf62-AS1Q17RA5 79 aa11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 DEFB112Q30KQ8 113 aa11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 LINC00477Q96M19 166 aa11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 USP9YO00507 2555 aaPredicted RBP11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 ZANQ9Y493 2812 aa11.61□□□□□ -0.55
CACNA1E-208ENST00000533229 A0A096LNT2 108 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 H3BVH4 76 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 SNAI2O43623 268 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 SRD5A1P18405 259 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms