RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 KLLNB2CW77 178 aa9.15□□□□□ -0.94
COPB1-208ENST00000532088 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
COPB1-208ENST00000532088 UBE2G1P62253 170 aa9.15□□□□□ -0.94
COPB1-208ENST00000532088 Q6ZWC4 215 aa9.15□□□□□ -0.94
COPB1-208ENST00000532088 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.94
COPB1-208ENST00000532088 Q86TA4 180 aa9.15□□□□□ -0.94
COPB1-208ENST00000532088 NOTCH1P46531 2555 aa9.15□□□□□ -0.95
COPB1-208ENST00000532088 TRAV8-1A0A0A6YYK1 113 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 LTAP01374 205 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 GIG44P09565 113 aaPredicted RBP9.14□□□□□ -0.95
COPB1-208ENST00000532088 DEFB121Q5J5C9 76 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 UQCC3Q6UW78 93 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
COPB1-208ENST00000532088 ZFAND2AQ8N6M9 145 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 IGF2BP2-AS1Q96M15 143 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
COPB1-208ENST00000532088 AGRNO00468 2067 aa9.13□□□□□ -0.95
COPB1-208ENST00000532088 C9JCJ5 164 aa9.13□□□□□ -0.95
COPB1-208ENST00000532088 CRXO43186 299 aaPredicted RBP9.13□□□□□ -0.95
COPB1-208ENST00000532088 CA1P00915 261 aaPredicted RBP9.13□□□□□ -0.95
COPB1-208ENST00000532088 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
COPB1-208ENST00000532088 SRP19P09132 144 aaKnown RBP9.13□□□□□ -0.95
COPB1-208ENST00000532088 RPL35P42766 123 aaKnown RBP9.13□□□□□ -0.95
COPB1-208ENST00000532088 CSNK1G2-AS1Q8NCQ2 148 aa9.13□□□□□ -0.95
COPB1-208ENST00000532088 Q8TAT8 98 aa9.13□□□□□ -0.95
COPB1-208ENST00000532088 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
COPB1-208ENST00000532088 TREM1Q9NP99 234 aa9.13□□□□□ -0.95
COPB1-208ENST00000532088 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 M0R2Z0 102 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 INSP01308 110 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 SPINK13Q1W4C9 94 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 FAM74A3Q4VXF1 159 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 PRNTQ86SH4 94 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 TMEM183AQ8IXX5 376 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 TMEM256Q8N2U0 113 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 TVP23CQ96ET8 276 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 KRTAP4-12Q9BQ66 201 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 MLST8Q9BVC4 326 aa9.12□□□□□ -0.95
COPB1-208ENST00000532088 C7orf71A4D174 169 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 GPX1P07203 203 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 PRB4P10163 310 aaPredicted RBP9.11□□□□□ -0.95
COPB1-208ENST00000532088 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 LCE3BQ5TA77 95 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 GFI1BQ5VTD9 330 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 Q6AWC8 147 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 BAGE2Q86Y30 109 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 RNF183Q96D59 192 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 TM2D3Q9BRN9 247 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 PARLQ9H300 379 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 BIN3Q9NQY0 253 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 XCL2Q9UBD3 114 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
COPB1-208ENST00000532088 NHLRC4P0CG21 123 aaPredicted RBP9.1□□□□□ -0.95
COPB1-208ENST00000532088 GNG4P50150 75 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 ZNF705AQ6ZN79 300 aaPredicted RBP9.1□□□□□ -0.95
COPB1-208ENST00000532088 SBSPONQ8IVN8 264 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 RCHY1Q96PM5 261 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 NEU1Q99519 415 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 LINC00467Q9BRT7 94 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 DERL1Q9BUN8 251 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 GOLT1BQ9Y3E0 138 aa9.1□□□□□ -0.95
COPB1-208ENST00000532088 TRAV21A0A0B4J279 112 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 C9JQL5 133 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 H7BYZ3 331 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
COPB1-208ENST00000532088 PFN1P07737 140 aaKnown RBP9.09□□□□□ -0.95
COPB1-208ENST00000532088 FXYD7P58549 80 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 CENPWQ5EE01 88 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 COMMD7Q86VX2 200 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 ASCL2Q99929 193 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
COPB1-208ENST00000532088 TRAV12-2A0A075B6T6 113 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 SMIM9A6NGZ8 99 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 SPRY2O43597 315 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 BTN1A1Q13410 526 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 PRR9Q5T870 116 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 C1orf158Q8N1D5 194 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 C8orf49Q96NF6 230 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 SMIM7Q9BQ49 75 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 PYGO2Q9BRQ0 406 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
COPB1-208ENST00000532088 TRBV20OR9-2A0A075B6H5 130 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 FABP5P3A8MUU1 101 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 ZNF727A8MUV8 499 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 GCGP01275 180 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 IGLV2-8P01709 118 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 RNASE4P34096 147 aaKnown RBP9.07□□□□□ -0.96
COPB1-208ENST00000532088 ZNF674Q2M3X9 581 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 SOHLH1Q5JUK2 328 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 ZMAT4Q9H898 229 aa9.07□□□□□ -0.96
COPB1-208ENST00000532088 TRAV12-3A0A0B4J271 114 aa9.06□□□□□ -0.96
COPB1-208ENST00000532088 RBMY1A1P0DJD3 496 aaKnown RBP9.06□□□□□ -0.96
COPB1-208ENST00000532088 RBMY1CP0DJD4 496 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms