RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
LRRK1-207ENST00000531270 C17orf58Q2M2W7 97 aa11.6□□□□□ -0.55
LRRK1-207ENST00000531270 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
LRRK1-207ENST00000531270 EP300Q09472 2414 aaPredicted RBP11.59□□□□□ -0.55
LRRK1-207ENST00000531270 GAGE12HA6NDE8 117 aa11.59□□□□□ -0.55
LRRK1-207ENST00000531270 NCR3O14931 201 aa11.59□□□□□ -0.55
LRRK1-207ENST00000531270 NPBQ8NG41 125 aa11.59□□□□□ -0.55
LRRK1-207ENST00000531270 LOXP28300 417 aaPredicted RBP11.59□□□□□ -0.55
LRRK1-207ENST00000531270 SLC25A29Q8N8R3 303 aa11.59□□□□□ -0.55
LRRK1-207ENST00000531270 VOPP1Q96AW1 172 aa11.59□□□□□ -0.55
LRRK1-207ENST00000531270 K7EP34 96 aa11.59□□□□□ -0.55
LRRK1-207ENST00000531270 DOCK4Q8N1I0 1966 aa11.59□□□□□ -0.55
LRRK1-207ENST00000531270 COL11A1P12107 1806 aaPredicted RBP11.59□□□□□ -0.55
LRRK1-207ENST00000531270 SLURP1P55000 103 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 FOXE3Q13461 319 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 C17orf77Q96MU5 243 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 ICOSQ9Y6W8 199 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 FANCMQ8IYD8 2048 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 MPDZO75970 2070 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 ABCA4P78363 2273 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 F8VRH5 84 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 BVES-AS1Q5T3Y7 98 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 FOXI2Q6ZQN5 318 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 DYNAPQ8N1N2 210 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 SVIPQ8NHG7 77 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 WIPF2Q8TF74 440 aaPredicted RBP11.58□□□□□ -0.56
LRRK1-207ENST00000531270 A0A1W2PPM0 123 aa11.58□□□□□ -0.56
LRRK1-207ENST00000531270 ELANEP08246 267 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 COX8AP10176 69 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 ADCYAP1P18509 176 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 Q6ZR03 302 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 K7EP13 123 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 GP9P14770 177 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 LMO1P25800 156 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 LGALS9BQ3B8N2 356 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 LGALS9CQ6DKI2 356 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 CEP250Q9BV73 2442 aa11.57□□□□□ -0.56
LRRK1-207ENST00000531270 IGLV3-9A0A075B6K5 115 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 FANCD2OSQ96PS1 177 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 CFPP27918 469 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 WT1-ASQ06250 92 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 HIST2H2BCQ6DN03 193 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 Q8TCH9 128 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 SPATA25Q9BR10 227 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 NDUFS7O75251 213 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 IGLL1P15814 213 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 C9orf66Q5T8R8 295 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 KLF2Q9Y5W3 355 aaPredicted RBP11.56□□□□□ -0.56
LRRK1-207ENST00000531270 V9GYV3 84 aa11.56□□□□□ -0.56
LRRK1-207ENST00000531270 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 MP68P56378 58 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 Q6ZWC4 215 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 VSIG2Q96IQ7 327 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 IGKV3D-7A0A0C4DH55 119 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 Q6ZS49 121 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 SEM1Q6ZVN7 128 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 ALPK2Q86TB3 2170 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 A0A1B0GX51 115 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 DEFB4AO15263 64 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 PKIGQ9Y2B9 76 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 IGLL5B9A064 214 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 HOXB4P17483 251 aaPredicted RBP11.55□□□□□ -0.56
LRRK1-207ENST00000531270 SPANXA1Q9NS26 97 aa11.55□□□□□ -0.56
LRRK1-207ENST00000531270 VPREB3Q9UKI3 123 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 CHD5Q8TDI0 1954 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 MRPL36Q9P0J6 103 aaKnown RBP11.54□□□□□ -0.56
LRRK1-207ENST00000531270 DOCK10Q96BY6 2186 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 C9JQL5 133 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 C17orf82Q86X59 251 aaPredicted RBP11.54□□□□□ -0.56
LRRK1-207ENST00000531270 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 TMEM14CQ9P0S9 112 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 COX7A2LO14548 114 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 CFC1BP0CG36 223 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 CFC1P0CG37 223 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 SEC61GP60059 68 aa11.54□□□□□ -0.56
LRRK1-207ENST00000531270 PDCD11Q14690 1871 aaKnown RBP11.54□□□□□ -0.56
LRRK1-207ENST00000531270 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 LRRK1Q38SD2 2015 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 MYO7BQ6PIF6 2116 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 MRPL23Q16540 153 aaKnown RBP11.53□□□□□ -0.56
LRRK1-207ENST00000531270 C20orf78Q9BR46 151 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 NREPQ16612 68 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 ZNF726P1Q15940 193 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 ZFP2Q6ZN57 461 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
LRRK1-207ENST00000531270 LYL1P12980 280 aa11.52□□□□□ -0.56
LRRK1-207ENST00000531270 ZNF236Q9UL36 1845 aa11.52□□□□□ -0.56
LRRK1-207ENST00000531270 K7EQD1 137 aa11.52□□□□□ -0.56
LRRK1-207ENST00000531270 RNF183Q96D59 192 aa11.52□□□□□ -0.56
LRRK1-207ENST00000531270 SPTBN1Q01082 2364 aaKnown RBP11.52□□□□□ -0.56
LRRK1-207ENST00000531270 H0Y9J4 135 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 ATP5G1P05496 136 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 GATA1P15976 413 aaPredicted RBP11.52□□□□□ -0.57
LRRK1-207ENST00000531270 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 PATJQ8NI35 1801 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 SDK2Q58EX2 2172 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 NPSP0C0P6 89 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 FER1L5A0AVI2 2057 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms