RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 COX7A2LO14548 114 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 HMGB3O15347 200 aaKnown RBP1.19□□□□□ -2.22
CD44-233ENST00000531141 LY6HO94772 140 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 NDUFB2O95178 105 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 GADD45GO95257 159 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 ZNF682O95780 498 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 FAM107AO95990 144 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 SOD1P00441 154 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 IFNA10P01566 189 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 IFNA7P01567 189 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 APOBP04114 4563 aaKnown RBP1.19□□□□□ -2.22
CD44-233ENST00000531141 LGALS1P09382 135 aaKnown RBP1.19□□□□□ -2.22
CD44-233ENST00000531141 ARL14EPLP0DKL9 152 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 RPS4Y1P22090 263 aaKnown RBP1.19□□□□□ -2.22
CD44-233ENST00000531141 SRP9P49458 86 aaKnown RBP1.19□□□□□ -2.22
CD44-233ENST00000531141 DAPP51397 102 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 TSPEAR-AS2P59090 65 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 TBPL1P62380 186 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 SPCS2Q15005 226 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 KCNJ8Q15842 424 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 DEFB110Q30KQ9 67 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 TMEM128Q5BJH2 165 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 NCMAPQ5T1S8 102 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 RASL11AQ6T310 242 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 C1orf174Q8IYL3 243 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 UMODL1-AS1Q8N2C9 162 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 C12orf45Q8N5I9 185 aaPredicted RBP1.19□□□□□ -2.22
CD44-233ENST00000531141 DCANP1Q8TF63 244 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 LCN9Q8WX39 176 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 MAFIPQ8WZ33 124 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 SLC7A6Q92536 515 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 BORCS5Q969J3 196 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 PLEKHB2Q96CS7 222 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 C2orf50Q96LR7 162 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 SERPINI1Q99574 410 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 MND1Q9BWT6 205 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 BPESC1Q9GZL8 116 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 IMUPQ9GZP8 106 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 TMEM222Q9H0R3 208 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 RNASE7Q9H1E1 156 aaKnown RBP1.19□□□□□ -2.22
CD44-233ENST00000531141 XAGE1AQ9HD64 81 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 UQCC1Q9NVA1 299 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 TVP23BQ9NYZ1 205 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 LAMTOR3Q9UHA4 124 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 OR52A1Q9UKL2 312 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 ERGIC3Q9Y282 383 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 COQ4Q9Y3A0 265 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 PKHD1P08F94 4074 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 MED12LQ86YW9 2145 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 HEATR5BQ9P2D3 2071 aa1.19□□□□□ -2.22
CD44-233ENST00000531141 TRBV20OR9-2A0A075B6H5 130 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 TRAV9-1A0A075B6T8 112 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 TRAV38-1A0A0B4J264 116 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 TRAV4A0A0B4J268 109 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 A0A0G2JQZ4 141 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 GRIFINA4D1Z8 144 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 DPRXA6NFQ7 191 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 A8MUN3 132 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 C9JCJ5 164 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 H3BPC8 53 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 LST1O00453 97 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 MFSD11O43934 449 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 C1QAP02745 245 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 MSMBP08118 114 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 SRP19P09132 144 aaKnown RBP1.18□□□□□ -2.22
CD44-233ENST00000531141 NPPCP23582 126 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 NCALDP61601 193 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 GNG5P63218 68 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 CCDC58Q4VC31 144 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 TNFAIP8L3Q5GJ75 292 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 SAMD13Q5VXD3 122 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 Q6Q795 121 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 SCIMPQ6UWF3 145 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 ANGPTL5Q86XS5 388 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 CLVS1Q8IUQ0 354 aaPredicted RBP1.18□□□□□ -2.22
CD44-233ENST00000531141 DEFB106AQ8N104 65 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 C10orf126Q8N4M7 172 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 RPP25LQ8N5L8 163 aaKnown RBP1.18□□□□□ -2.22
CD44-233ENST00000531141 FAM24BQ8N5W8 94 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 CNEP1R1Q8N9A8 125 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 WFDC9Q8NEX5 89 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 NUP35Q8NFH5 326 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 OR4S1Q8NGB4 309 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 OR9Q1Q8NGQ5 310 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 OR13C4Q8NGS5 318 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 OR13D1Q8NGV5 346 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 OR2T4Q8NH00 348 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 ZNF675Q8TD23 568 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 ACOT12Q8WYK0 555 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 TOMM6Q96B49 74 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 MRPS24Q96EL2 167 aaKnown RBP1.18□□□□□ -2.22
CD44-233ENST00000531141 LYSMD1Q96S90 227 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 CCDC32Q9BV29 185 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 ZNF471Q9BX82 626 aaPredicted RBP1.18□□□□□ -2.22
CD44-233ENST00000531141 WDR61Q9GZS3 305 aaKnown RBP1.18□□□□□ -2.22
CD44-233ENST00000531141 C11orf1Q9H5F2 150 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 C16orf95Q9H693 158 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 CXorf21Q9HAI6 301 aa1.18□□□□□ -2.22
CD44-233ENST00000531141 PAIP2BQ9ULR5 123 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms