RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 PRNTQ86SH4 94 aa15.35■□□□□ 0.05
CAPN1-220ENST00000530567 Q86TA4 180 aa15.35■□□□□ 0.05
CAPN1-220ENST00000530567 ZNF705GA8MUZ8 300 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-220ENST00000530567 F6UZH7 168 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 IFNA1P01562 189 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 PCNPQ8WW12 178 aaKnown RBP15.34■□□□□ 0.05
CAPN1-220ENST00000530567 LINC01587Q99440 93 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 TREM1Q9NP99 234 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 LOC102723971A0A1B0GUV8 181 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 TAS2R60P59551 318 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 MEF2BQ02080 365 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-220ENST00000530567 C11orf52Q96A22 123 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 C8orf49Q96NF6 230 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 WWC2-AS2Q96NR7 200 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 TXNDC17Q9BRA2 123 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 NIPSNAP3BQ9BS92 247 aa15.34■□□□□ 0.05
CAPN1-220ENST00000530567 AKR1C3P42330 323 aa15.33■□□□□ 0.04
CAPN1-220ENST00000530567 TMEM183BQ1AE95 376 aa15.33■□□□□ 0.04
CAPN1-220ENST00000530567 RRN3P1Q2M238 152 aa15.33■□□□□ 0.04
CAPN1-220ENST00000530567 Q6AWC8 147 aa15.33■□□□□ 0.04
CAPN1-220ENST00000530567 FMC1Q96HJ9 113 aa15.33■□□□□ 0.04
CAPN1-220ENST00000530567 NDFIP1Q9BT67 221 aa15.33■□□□□ 0.04
CAPN1-220ENST00000530567 VAX2Q9UIW0 290 aa15.33■□□□□ 0.04
CAPN1-220ENST00000530567 DNAH7Q8WXX0 4024 aa15.32■□□□□ 0.04
CAPN1-220ENST00000530567 TRBV6-1A0A0K0K1D8 114 aa15.32■□□□□ 0.04
CAPN1-220ENST00000530567 AZU1P20160 251 aa15.32■□□□□ 0.04
CAPN1-220ENST00000530567 PLAC8L1A1L4L8 177 aa15.31■□□□□ 0.04
CAPN1-220ENST00000530567 TAGLN2P37802 199 aaKnown RBP15.31■□□□□ 0.04
CAPN1-220ENST00000530567 PYGO2Q9BRQ0 406 aa15.31■□□□□ 0.04
CAPN1-220ENST00000530567 ZNF80P51504 273 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-220ENST00000530567 SAPCD1Q5SSQ6 148 aa15.3■□□□□ 0.04
CAPN1-220ENST00000530567 LINC00467Q9BRT7 94 aa15.3■□□□□ 0.04
CAPN1-220ENST00000530567 LTAP01374 205 aa15.29■□□□□ 0.04
CAPN1-220ENST00000530567 HTN1P15515 57 aa15.29■□□□□ 0.04
CAPN1-220ENST00000530567 UBE2G1P62253 170 aa15.29■□□□□ 0.04
CAPN1-220ENST00000530567 IFITM2Q01629 132 aa15.29■□□□□ 0.04
CAPN1-220ENST00000530567 RNASE8Q8TDE3 154 aaKnown RBP15.29■□□□□ 0.04
CAPN1-220ENST00000530567 DERL1Q9BUN8 251 aa15.29■□□□□ 0.04
CAPN1-220ENST00000530567 RBFOX3A6NFN3 312 aa15.28■□□□□ 0.04
CAPN1-220ENST00000530567 PDE6DO43924 150 aa15.28■□□□□ 0.04
CAPN1-220ENST00000530567 ZNF506Q5JVG8 444 aa15.28■□□□□ 0.04
CAPN1-220ENST00000530567 COX8CQ7Z4L0 72 aa15.28■□□□□ 0.04
CAPN1-220ENST00000530567 CELA1Q9UNI1 258 aa15.28■□□□□ 0.04
CAPN1-220ENST00000530567 TMEM189A5PLL7 270 aa15.27■□□□□ 0.04
CAPN1-220ENST00000530567 GCGP01275 180 aa15.27■□□□□ 0.04
CAPN1-220ENST00000530567 SMUG1Q53HV7 270 aa15.27■□□□□ 0.04
CAPN1-220ENST00000530567 IL17DQ8TAD2 202 aa15.27■□□□□ 0.04
CAPN1-220ENST00000530567 TMEM263Q8WUH6 116 aaKnown RBP15.27■□□□□ 0.04
CAPN1-220ENST00000530567 ZFP30Q9Y2G7 519 aa15.27■□□□□ 0.04
CAPN1-220ENST00000530567 IGHV1OR15-1A0A075B7D0 117 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 TRAV21A0A0B4J279 112 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 S100A9P06702 114 aaKnown RBP15.26■□□□□ 0.03
CAPN1-220ENST00000530567 RPL35P42766 123 aaKnown RBP15.26■□□□□ 0.03
CAPN1-220ENST00000530567 EMP1P54849 157 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 FAM210AQ96ND0 272 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 RGS13O14921 159 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 TOR2AQ5JU69 321 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 MUC21Q5SSG8 566 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 EIF4E3Q8N5X7 224 aaKnown RBP15.26■□□□□ 0.03
CAPN1-220ENST00000530567 C16orf74Q96GX8 76 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 ZC2HC1AQ96GY0 325 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 TP53TG3Q9ULZ0 132 aa15.26■□□□□ 0.03
CAPN1-220ENST00000530567 ANXA2RQ3ZCQ2 193 aa15.25■□□□□ 0.03
CAPN1-220ENST00000530567 ZNF493Q6ZR52 646 aa15.25■□□□□ 0.03
CAPN1-220ENST00000530567 TMEM183AQ8IXX5 376 aa15.25■□□□□ 0.03
CAPN1-220ENST00000530567 C11orf72Q8NBR9 251 aa15.25■□□□□ 0.03
CAPN1-220ENST00000530567 C11orf21Q9P2W6 132 aa15.25■□□□□ 0.03
CAPN1-220ENST00000530567 DKK2Q9UBU2 259 aa15.25■□□□□ 0.03
CAPN1-220ENST00000530567 PFN1P07737 140 aaKnown RBP15.24■□□□□ 0.03
CAPN1-220ENST00000530567 CRIP1P50238 77 aa15.24■□□□□ 0.03
CAPN1-220ENST00000530567 NHLRC2Q8NBF2 726 aa15.24■□□□□ 0.03
CAPN1-220ENST00000530567 C11orf45Q8TAV5 145 aa15.24■□□□□ 0.03
CAPN1-220ENST00000530567 MLST8Q9BVC4 326 aa15.24■□□□□ 0.03
CAPN1-220ENST00000530567 CBY3A6NI87 242 aa15.23■□□□□ 0.03
CAPN1-220ENST00000530567 NANOS2P60321 138 aaKnown RBP15.23■□□□□ 0.03
CAPN1-220ENST00000530567 TDRG1Q3Y452 100 aa15.23■□□□□ 0.03
CAPN1-220ENST00000530567 FAM222AQ5U5X8 452 aa15.23■□□□□ 0.03
CAPN1-220ENST00000530567 ZNF767PQ75MW2 155 aa15.23■□□□□ 0.03
CAPN1-220ENST00000530567 MUC7Q8TAX7 377 aa15.23■□□□□ 0.03
CAPN1-220ENST00000530567 MED9Q9NWA0 146 aa15.23■□□□□ 0.03
CAPN1-220ENST00000530567 NAGKQ9UJ70 344 aa15.23■□□□□ 0.03
CAPN1-220ENST00000530567 TRBV20OR9-2A0A075B6H5 130 aa15.22■□□□□ 0.03
CAPN1-220ENST00000530567 CENPWQ5EE01 88 aa15.22■□□□□ 0.03
CAPN1-220ENST00000530567 BAGE2Q86Y30 109 aa15.22■□□□□ 0.03
CAPN1-220ENST00000530567 RAB19A4D1S5 217 aa15.21■□□□□ 0.03
CAPN1-220ENST00000530567 TMEM250H0YL14 139 aa15.21■□□□□ 0.03
CAPN1-220ENST00000530567 SPART-AS1P0CW21 52 aa15.21■□□□□ 0.03
CAPN1-220ENST00000530567 FAM159AQ6UWV7 190 aa15.21■□□□□ 0.03
CAPN1-220ENST00000530567 EIF5A2Q9GZV4 153 aaKnown RBP15.21■□□□□ 0.03
CAPN1-220ENST00000530567 CXorf65A6NEN9 183 aa15.2■□□□□ 0.02
CAPN1-220ENST00000530567 NDUFS6O75380 124 aaKnown RBP15.2■□□□□ 0.02
CAPN1-220ENST00000530567 IGLV2-8P01709 118 aa15.2■□□□□ 0.02
CAPN1-220ENST00000530567 ZNF674Q2M3X9 581 aa15.2■□□□□ 0.02
CAPN1-220ENST00000530567 C12orf74Q32Q52 190 aa15.2■□□□□ 0.02
CAPN1-220ENST00000530567 IBA57Q5T440 356 aaKnown RBP15.2■□□□□ 0.02
CAPN1-220ENST00000530567 GSN-AS1Q9NRJ2 163 aa15.2■□□□□ 0.02
CAPN1-220ENST00000530567 SH2D1AO60880 128 aa15.19■□□□□ 0.02
CAPN1-220ENST00000530567 NOP10Q9NPE3 64 aaKnown RBP15.19■□□□□ 0.02
CAPN1-220ENST00000530567 TIMM8BQ9Y5J9 83 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-220ENST00000530567 LYRM9A8MSI8 78 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms