RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 PRAC2D3DTV9 90 aa9.71□□□□□ -0.85
SCN3B-206ENST00000530277 GDF5OSQ5U4N7 250 aa9.71□□□□□ -0.85
SCN3B-206ENST00000530277 PET117Q6UWS5 81 aa9.71□□□□□ -0.85
SCN3B-206ENST00000530277 SAP30O75446 220 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 MRPL51Q4U2R6 128 aaKnown RBP9.71□□□□□ -0.86
SCN3B-206ENST00000530277 Q71RC1 249 aaPredicted RBP9.71□□□□□ -0.86
SCN3B-206ENST00000530277 IGF2BP2-AS1Q96M15 143 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 ADAMTS20P59510 1910 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 TEX22C9J3V5 150 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.71□□□□□ -0.86
SCN3B-206ENST00000530277 I3L2K1 104 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 M0R1W7 72 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 ADORA2A-AS1P86434 159 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.86
SCN3B-206ENST00000530277 FLNBO75369 2602 aaKnown RBP9.7□□□□□ -0.86
SCN3B-206ENST00000530277 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 PRB1P04280 392 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 FOXE3Q13461 319 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 MOB4Q9Y3A3 225 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 SPCS1Q9Y6A9 102 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 H3BRN7 92 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 IGLV2-8P01709 118 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 BLCAPP62952 87 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 OCIAD2Q56VL3 154 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 SLC50A1Q9BRV3 221 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 SIGLEC8Q9NYZ4 499 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 DMXL1Q9Y485 3027 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 SNRPD3P62318 126 aaKnown RBP9.7□□□□□ -0.86
SCN3B-206ENST00000530277 CR1LQ2VPA4 569 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 PEF1Q9UBV8 284 aaKnown RBP9.7□□□□□ -0.86
SCN3B-206ENST00000530277 TP53TG3Q9ULZ0 132 aa9.7□□□□□ -0.86
SCN3B-206ENST00000530277 TEX43Q6ZNM6 134 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 ZNF418Q8TF45 676 aaPredicted RBP9.69□□□□□ -0.86
SCN3B-206ENST00000530277 WIPF2Q8TF74 440 aaPredicted RBP9.69□□□□□ -0.86
SCN3B-206ENST00000530277 NBL1P41271 181 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 FAM231DQ6ZW35 169 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 DUX3Q96PT4 197 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 DCHS1Q96JQ0 3298 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 LTAP01374 205 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 HERVK_113P61574 105 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 C3orf36Q3SXR2 165 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 RNF5Q99942 180 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 ST20Q9HBF5 79 aa9.69□□□□□ -0.86
SCN3B-206ENST00000530277 KIR2DL5BA0A0G2JN68 375 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 KIR2DL5BA0A0G2JPC4 375 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 MINOS1Q5TGZ0 78 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 FAM104BQ5XKR9 115 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 KIR2DL5AQ8N109 375 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 DKK2Q9UBU2 259 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 CYSLTR1Q9Y271 337 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 MINOS1-NBL1R4GNA1 71 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 IGHV7-81A0A0B4J1V7 117 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 A0A0G2JLM5 398 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 J3QR89 54 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 SAMD13Q5VXD3 122 aa9.68□□□□□ -0.86
SCN3B-206ENST00000530277 SMIM13P0DJ93 91 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 HIST2H2BDQ6DRA6 164 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 RASL11AQ6T310 242 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 TRAV21A0A0B4J279 112 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 CTSGP08311 255 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 UBE2E1P51965 193 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 AGPAT4-IT1Q9H0P7 198 aa9.67□□□□□ -0.86
SCN3B-206ENST00000530277 ANKRD17O75179 2603 aaKnown RBP9.67□□□□□ -0.86
SCN3B-206ENST00000530277 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 IGHV4-38-2P0DP08 117 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 LOXL1Q08397 574 aaPredicted RBP9.66□□□□□ -0.86
SCN3B-206ENST00000530277 TTC9CQ8N5M4 171 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 KLK9Q9UKQ9 250 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 IGHV2-70DA0A0C4DH43 119 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 NPC2P61916 151 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 SMIM12Q96EX1 92 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 A0A1B0GW15 77 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 ATP5LO75964 103 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 DPM2O94777 84 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 IGKCP01834 107 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 HOXB4P17483 251 aaPredicted RBP9.66□□□□□ -0.86
SCN3B-206ENST00000530277 SPINK13Q1W4C9 94 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 ORAOV1Q8WV07 137 aa9.66□□□□□ -0.86
SCN3B-206ENST00000530277 NXT2Q9NPJ8 142 aaKnown RBP9.66□□□□□ -0.86
SCN3B-206ENST00000530277 MRPL16Q9NX20 251 aaKnown RBP9.66□□□□□ -0.86
SCN3B-206ENST00000530277 ZNF492Q9P255 531 aa9.65□□□□□ -0.86
SCN3B-206ENST00000530277 PAX1P15863 534 aa9.65□□□□□ -0.86
SCN3B-206ENST00000530277 PCP2Q8IVA1 136 aa9.65□□□□□ -0.86
SCN3B-206ENST00000530277 GAGE1Q13065 139 aa9.65□□□□□ -0.86
SCN3B-206ENST00000530277 COL5A1P20908 1838 aaPredicted RBP9.65□□□□□ -0.87
SCN3B-206ENST00000530277 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.87
SCN3B-206ENST00000530277 OR2K2Q8NGT1 345 aa9.65□□□□□ -0.87
SCN3B-206ENST00000530277 CFHR4Q92496 578 aa9.65□□□□□ -0.87
SCN3B-206ENST00000530277 FANCD2OSQ96PS1 177 aa9.65□□□□□ -0.87
SCN3B-206ENST00000530277 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCN3B-206ENST00000530277 DTX2Q86UW9 622 aa9.64□□□□□ -0.87
SCN3B-206ENST00000530277 GNRH2O43555 120 aa9.64□□□□□ -0.87
SCN3B-206ENST00000530277 LINC01587Q99440 93 aa9.64□□□□□ -0.87
SCN3B-206ENST00000530277 TMEM8BA6NDV4 472 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms