RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 C1QBP02746 253 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 TCRAP04437 139 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 ANXA2RQ3ZCQ2 193 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 CCDC28AQ8IWP9 274 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 LINC00612Q8N6U2 182 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 C11orf72Q8NBR9 251 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 EPDR1Q9UM22 224 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 hCG_2014768A0A024R1R8 64 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 MAP1LC3B2A6NCE7 125 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 IGLV2-11P01706 119 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 DEFB130BP0DP73 79 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 DEFB130AP0DP74 79 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 Q6AWC8 147 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 DNAH6Q9C0G6 4158 aa11.4□□□□□ -0.58
TSPAN4-218ENST00000529566 SERTM2A0A1B0GWG4 89 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 FAM74A7A6NL05 159 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 UMAD1C9J7I0 102 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 PFDN1O60925 122 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 LY6G6CO95867 125 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 LGALS9CQ6DKI2 356 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 IQCF2Q8IXL9 164 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 EIF4E3Q8N5X7 224 aaKnown RBP11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 MBD3L1Q8WWY6 194 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 TP53TG3Q9ULZ0 132 aa11.39□□□□□ -0.59
TSPAN4-218ENST00000529566 IGHV1OR15-1A0A075B7D0 117 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 A0A1B0GVG6 124 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 CBY3A6NI87 242 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 UBE2G2P60604 165 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 EIF5AP63241 154 aaKnown RBP11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 AKAP14Q86UN6 197 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 FAM210BQ96KR6 192 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 SGK494Q96LW2 274 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 GSN-AS1Q9NRJ2 163 aa11.38□□□□□ -0.59
TSPAN4-218ENST00000529566 TPT1P13693 172 aaKnown RBP11.37□□□□□ -0.59
TSPAN4-218ENST00000529566 HTN3P15516 51 aa11.37□□□□□ -0.59
TSPAN4-218ENST00000529566 DPPA3Q6W0C5 159 aa11.37□□□□□ -0.59
TSPAN4-218ENST00000529566 ZNF680Q8NEM1 530 aa11.37□□□□□ -0.59
TSPAN4-218ENST00000529566 SNURFLB1AK76 121 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 RGS13O14921 159 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 FAM213BQ8TBF2 198 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 SFT2D1Q8WV19 159 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 LINC00479Q96M42 142 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 ATG101Q9BSB4 218 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 NKX6-2Q9C056 277 aaPredicted RBP11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 TREM1Q9NP99 234 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 PSG8Q9UQ74 426 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 KLF12Q9Y4X4 402 aa11.36□□□□□ -0.59
TSPAN4-218ENST00000529566 F6UZH7 168 aa11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 TCL1AP56279 114 aa11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 TDRG1Q3Y452 100 aa11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 MUC21Q5SSG8 566 aa11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 Q6ZTI0 123 aa11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 TMEM75Q8N9X5 138 aa11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 NDUFAF3Q9BU61 184 aa11.35□□□□□ -0.59
TSPAN4-218ENST00000529566 K7EQM0 130 aa11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 ATP5G1P05496 136 aa11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 ATP5G3P48201 142 aa11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 FLI1Q01543 452 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 TMEM88Q6PEY1 159 aa11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 C9orf62Q8N4C0 152 aa11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 C8orf49Q96NF6 230 aa11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 MDFICQ9P1T7 246 aa11.34□□□□□ -0.59
TSPAN4-218ENST00000529566 TRAV34A0A0B4J273 112 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 GAGE12BA1L429 117 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 PEX7O00628 323 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 SPINK4O60575 86 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 GAGE7O76087 117 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 IFNA7P01567 189 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 GAGE12FP0CL80 117 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 GAGE12GP0CL81 117 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 GAGE12IP0CL82 117 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 PRNTQ86SH4 94 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 HIST1H2BAQ96A08 127 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 ARL2-SNX15V9GYD0 113 aa11.33□□□□□ -0.6
TSPAN4-218ENST00000529566 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
TSPAN4-218ENST00000529566 F5H768 121 aa11.32□□□□□ -0.6
TSPAN4-218ENST00000529566 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
TSPAN4-218ENST00000529566 SLC51BQ86UW2 128 aa11.32□□□□□ -0.6
TSPAN4-218ENST00000529566 C18orf15Q96N68 181 aa11.32□□□□□ -0.6
TSPAN4-218ENST00000529566 C11orf21Q9P2W6 132 aa11.32□□□□□ -0.6
TSPAN4-218ENST00000529566 TRAV1-1A0A0B4J248 108 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 A0A1B0GV50 99 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 GNRH2O43555 120 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 PAGE4O60829 102 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 HOXA5P20719 270 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 CCL20P78556 96 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 FAM159AQ6UWV7 190 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
TSPAN4-218ENST00000529566 TRGV1A0A0A0MS02 117 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 SULT1A2P50226 295 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 RAB5CP51148 216 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 TMEM183BQ1AE95 376 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 LGALS9BQ3B8N2 356 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms