RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 DNAJC4Q9NNZ3 241 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 IGHV3-38A0A0C4DH36 116 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 FABP12A6NFH5 140 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 NOL3O60936 208 aaKnown RBP6.02□□□□□ -1.45
VPS11-203ENST00000529545 UPK1BO75841 260 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 CCNKO75909 580 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 OXTP01178 125 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 HIST1H1EP10412 219 aaKnown RBP6.02□□□□□ -1.45
VPS11-203ENST00000529545 TMEM78Q5T7P6 136 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 MORN5Q5VZ52 161 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 TMEM14EPQ6UXP3 125 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 IQCF2Q8IXL9 164 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 TOMM5Q8N4H5 51 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 OR1L4Q8NGR5 311 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 PFDN5Q99471 154 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 GGACTQ9BVM4 153 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 SRRQ9GZT4 340 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 AGPAT4-IT1Q9H0P7 198 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 Q9HAA7 133 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 TP53TG3Q9ULZ0 132 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 TIMM9Q9Y5J7 89 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
VPS11-203ENST00000529545 TRAV8-6A0A0B4J262 113 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 IBA57-AS1B1ANH7 110 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 M0R3E3 92 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 TSC22D2O75157 780 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 SFTA3P0C7M3 94 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 CRISP2P16562 243 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 CAMLGP49069 296 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 PPT1P50897 306 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 NHLRC2Q8NBF2 726 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 FAM19A4Q96LR4 140 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 TM2D2Q9BX73 214 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 SLC25A31Q9H0C2 315 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 AAMDCQ9H7C9 122 aa6.01□□□□□ -1.45
VPS11-203ENST00000529545 TRBV19A0A075B6N1 114 aa6□□□□□ -1.45
VPS11-203ENST00000529545 TAS2R30P59541 319 aa6□□□□□ -1.45
VPS11-203ENST00000529545 UBE2MP61081 183 aaKnown RBP6□□□□□ -1.45
VPS11-203ENST00000529545 TDRG1Q3Y452 100 aa6□□□□□ -1.45
VPS11-203ENST00000529545 LINC01556Q5JQF7 62 aa6□□□□□ -1.45
VPS11-203ENST00000529545 C9orf47Q6ZRZ4 202 aa6□□□□□ -1.45
VPS11-203ENST00000529545 OR10G4Q8NGN3 311 aa6□□□□□ -1.45
VPS11-203ENST00000529545 BLNKQ8WV28 456 aa6□□□□□ -1.45
VPS11-203ENST00000529545 ZNF479Q96JC4 524 aa6□□□□□ -1.45
VPS11-203ENST00000529545 SDHCQ99643 169 aaPredicted RBP6□□□□□ -1.45
VPS11-203ENST00000529545 MGST2Q99735 147 aa6□□□□□ -1.45
VPS11-203ENST00000529545 SPXQ9BT56 116 aa6□□□□□ -1.45
VPS11-203ENST00000529545 DNAH8Q96JB1 4490 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 C9orf170A2RU37 121 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 PTTG1O95997 202 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 TNFSF8P32971 234 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 TIRAPP58753 221 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 PDE6HQ13956 83 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 PYDC2Q56P42 97 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 OR10J3Q5JRS4 329 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 MIC13Q5XKP0 118 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 NRARPQ7Z6K4 114 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 ZFAND2AQ8N6M9 145 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 DEDD2Q8WXF8 326 aa5.99□□□□□ -1.45
VPS11-203ENST00000529545 IGKV2-40A0A087WW87 121 aaPredicted RBP5.98□□□□□ -1.45
VPS11-203ENST00000529545 L7N2F9 121 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 IGKV2D-40P01614 121 aaPredicted RBP5.98□□□□□ -1.45
VPS11-203ENST00000529545 PFN1P07737 140 aaKnown RBP5.98□□□□□ -1.45
VPS11-203ENST00000529545 VAMP2P63027 116 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 ARL16Q0P5N6 197 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 IAH1Q2TAA2 248 aaPredicted RBP5.98□□□□□ -1.45
VPS11-203ENST00000529545 MUC21Q5SSG8 566 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 Q6ZSA8 131 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 SLC7A5P1Q8MH63 180 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 EXOC3-AS1Q8N2X6 119 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 OR4C5Q8NGB2 326 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 RASL10AQ92737 203 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 SOSTQ9BQB4 213 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 C20orf85Q9H1P6 137 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 GPN1Q9HCN4 374 aaPredicted RBP5.98□□□□□ -1.45
VPS11-203ENST00000529545 GSKIPQ9P0R6 139 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 TMEM14CQ9P0S9 112 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 ZNF492Q9P255 531 aa5.98□□□□□ -1.45
VPS11-203ENST00000529545 TRGV11A0A075B6L2 103 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 TRAV4A0A0B4J268 109 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 TRBV7-9A0A0J9YWB2 115 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 NDUFB4O95168 129 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 IGHV3-30P01768 117 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 IGHV3-33P01772 117 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 IGHV3-30-3P0DP02 117 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 IGHV3-30-5P0DP03 117 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 ZNF138P52744 262 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 TMEM183BQ1AE95 376 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 PRR9Q5T870 116 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 FAM122CQ6P4D5 195 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 FAM159AQ6UWV7 190 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 TMEM183AQ8IXX5 376 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 TRIM63Q969Q1 353 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 SLC39A9Q9NUM3 307 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 UQCC1Q9NVA1 299 aa5.97□□□□□ -1.45
VPS11-203ENST00000529545 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.96□□□□□ -1.46
VPS11-203ENST00000529545 LOC100131303A0A0U1RQF7 123 aa5.96□□□□□ -1.46
VPS11-203ENST00000529545 C7orf66A4D0T2 115 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms