RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 IGHV4-28A0A0C4DH34 117 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 LOC102723971A0A1B0GUV8 181 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 ZNF705GA8MUZ8 300 aaPredicted RBP10.11□□□□□ -0.79
USF1-209ENST00000529476 PRM2P04554 102 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 MEF2BQ02080 365 aaPredicted RBP10.11□□□□□ -0.79
USF1-209ENST00000529476 Q6ZQT7 251 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 Q86TA4 180 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 TMEM256Q8N2U0 113 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 C2CD4CQ8TF44 421 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 NEU1Q99519 415 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 C20orf144Q9BQM9 153 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 TREM1Q9NP99 234 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
USF1-209ENST00000529476 FBLL1A6NHQ2 334 aaKnown RBP10.1□□□□□ -0.79
USF1-209ENST00000529476 ZNF324O75467 553 aaPredicted RBP10.1□□□□□ -0.79
USF1-209ENST00000529476 MIFP14174 115 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 UBE2G1P62253 170 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 FMC1Q96HJ9 113 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 TXNDC17Q9BRA2 123 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 NIPSNAP3BQ9BS92 247 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 NDFIP1Q9BT67 221 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 EDA2RQ9HAV5 297 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 KLF12Q9Y4X4 402 aa10.1□□□□□ -0.79
USF1-209ENST00000529476 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 SMIM9A6NGZ8 99 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 H7BYZ3 331 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 HTN1P15515 57 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 TAGLN2P37802 199 aaKnown RBP10.09□□□□□ -0.79
USF1-209ENST00000529476 IFITM2Q01629 132 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 TMEM183BQ1AE95 376 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 RRN3P1Q2M238 152 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 C11orf52Q96A22 123 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 DNAH1Q9P2D7 4330 aa10.09□□□□□ -0.79
USF1-209ENST00000529476 AZU1P20160 251 aa10.08□□□□□ -0.8
USF1-209ENST00000529476 TAS2R60P59551 318 aa10.08□□□□□ -0.8
USF1-209ENST00000529476 ZNF506Q5JVG8 444 aa10.08□□□□□ -0.8
USF1-209ENST00000529476 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
USF1-209ENST00000529476 Q6AWC8 147 aa10.08□□□□□ -0.8
USF1-209ENST00000529476 C11orf68Q9H3H3 251 aaKnown RBP10.08□□□□□ -0.8
USF1-209ENST00000529476 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 PDE6DO43924 150 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 GCGP01275 180 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 ZNF80P51504 273 aaPredicted RBP10.07□□□□□ -0.8
USF1-209ENST00000529476 EMP1P54849 157 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 TOR2AQ5JU69 321 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 FAM210AQ96ND0 272 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 PYGO2Q9BRQ0 406 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 DERL1Q9BUN8 251 aa10.07□□□□□ -0.8
USF1-209ENST00000529476 RGS13O14921 159 aa10.06□□□□□ -0.8
USF1-209ENST00000529476 LTAP01374 205 aa10.06□□□□□ -0.8
USF1-209ENST00000529476 S100A9P06702 114 aaKnown RBP10.06□□□□□ -0.8
USF1-209ENST00000529476 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
USF1-209ENST00000529476 SMUG1Q53HV7 270 aa10.06□□□□□ -0.8
USF1-209ENST00000529476 MUC21Q5SSG8 566 aa10.06□□□□□ -0.8
USF1-209ENST00000529476 EIF5A2Q9GZV4 153 aaKnown RBP10.06□□□□□ -0.8
USF1-209ENST00000529476 MED9Q9NWA0 146 aa10.06□□□□□ -0.8
USF1-209ENST00000529476 ZFP30Q9Y2G7 519 aa10.06□□□□□ -0.8
USF1-209ENST00000529476 IGHV1OR15-1A0A075B7D0 117 aa10.05□□□□□ -0.8
USF1-209ENST00000529476 TRAV21A0A0B4J279 112 aa10.05□□□□□ -0.8
USF1-209ENST00000529476 ZNF767PQ75MW2 155 aa10.05□□□□□ -0.8
USF1-209ENST00000529476 NHLRC2Q8NBF2 726 aa10.05□□□□□ -0.8
USF1-209ENST00000529476 ZC2HC1AQ96GY0 325 aa10.05□□□□□ -0.8
USF1-209ENST00000529476 LINC00467Q9BRT7 94 aa10.05□□□□□ -0.8
USF1-209ENST00000529476 NAGKQ9UJ70 344 aa10.05□□□□□ -0.8
USF1-209ENST00000529476 PLAC8L1A1L4L8 177 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 RAB19A4D1S5 217 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 TMEM189A5PLL7 270 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 CBY3A6NI87 242 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 PFN1P07737 140 aaKnown RBP10.04□□□□□ -0.8
USF1-209ENST00000529476 RAB14P61106 215 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 COX8CQ7Z4L0 72 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 BAGE2Q86Y30 109 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 EIF4E3Q8N5X7 224 aaKnown RBP10.04□□□□□ -0.8
USF1-209ENST00000529476 RNASE8Q8TDE3 154 aaKnown RBP10.04□□□□□ -0.8
USF1-209ENST00000529476 C16orf74Q96GX8 76 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 TP53TG3Q9ULZ0 132 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 CELA1Q9UNI1 258 aa10.04□□□□□ -0.8
USF1-209ENST00000529476 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
USF1-209ENST00000529476 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
USF1-209ENST00000529476 CASC10Q5T4H9 136 aa10.03□□□□□ -0.8
USF1-209ENST00000529476 IL17DQ8TAD2 202 aa10.03□□□□□ -0.8
USF1-209ENST00000529476 TMEM263Q8WUH6 116 aaKnown RBP10.03□□□□□ -0.8
USF1-209ENST00000529476 C11orf21Q9P2W6 132 aa10.03□□□□□ -0.8
USF1-209ENST00000529476 TMEM250H0YL14 139 aa10.02□□□□□ -0.81
USF1-209ENST00000529476 CRIP1P50238 77 aa10.02□□□□□ -0.81
USF1-209ENST00000529476 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
USF1-209ENST00000529476 FAM159AQ6UWV7 190 aa10.02□□□□□ -0.81
USF1-209ENST00000529476 ZNF493Q6ZR52 646 aa10.02□□□□□ -0.81
USF1-209ENST00000529476 C11orf45Q8TAV5 145 aa10.02□□□□□ -0.81
USF1-209ENST00000529476 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
USF1-209ENST00000529476 TRBV20OR9-2A0A075B6H5 130 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 CXorf65A6NEN9 183 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 FABP5P3A8MUU1 101 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 GNRH2O43555 120 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 SH2D1AO60880 128 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 SRP19P09132 144 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms