RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 A0A0G2JRQ6 117 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 A8MTW9 85 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 KRTAP4-16G5E9R7 235 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 GABARAPH6UMI1 98 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 GABARAPO95166 117 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 CFDP00746 253 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 ZNF688P0C7X2 276 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 SPART-AS1P0CW21 52 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 RD3LP0DJH9 198 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 HLA-DRB4P13762 266 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 OR10J1P30954 320 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 GPX4P36969 197 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 ETV6P41212 452 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 DAZ2Q13117 558 aaKnown RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 DHRS2Q13268 280 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 C12orf74Q32Q52 190 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 PRSS54Q6PEW0 395 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 SNX29P2Q8IUI4 249 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 DEDD2Q8WXF8 326 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 CHCHD10Q8WYQ3 142 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 SCGB3A2Q96PL1 93 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 RTBDNQ9BSG5 229 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 MAP1LC3CQ9BXW4 147 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 DAZ3Q9NR90 486 aaKnown RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 MRPL36Q9P0J6 103 aaKnown RBP3.03□□□□□ -1.92
CSDE1-212ENST00000529046 SHPKQ9UHJ6 478 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 CBY1Q9Y3M2 126 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 HLA-DRB4X5D2U9 266 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 DEFB131BA0A096LNP1 70 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 A0A1B0GW15 77 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 DUXBA0A1W2PPF3 345 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 CRYM-AS1A6NIL9 109 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 KNCNA6PVL3 124 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 SNRPGP15A8MWD9 76 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 FAM25AB3EWG3 89 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 FAM25CB3EWG5 89 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 FAM25GB3EWG6 89 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 DISC1C4P0D8 188 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 ISLRO14498 428 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 DEFB4AO15263 64 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 HPGDSO60760 199 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 RAB3DO95716 219 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 IL4P05112 153 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 FABP1P07148 127 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 SLC25A6P12236 298 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 PSMB3P49720 205 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 CCR6P51684 374 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 RND2P52198 227 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 VBP1P61758 197 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 B2MP61769 119 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 NCS1P62166 190 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 LSM3P62310 102 aaKnown RBP3.02□□□□□ -1.93
CSDE1-212ENST00000529046 SP6Q3SY56 376 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 PSMG4Q5JS54 123 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 ACTL10Q5JWF8 245 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 FOXI2Q6ZQN5 318 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 NKAPP1Q8N9T2 125 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 OR51G1Q8NGK1 321 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 OR13C8Q8NGS7 320 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 LHFPL5Q8TAF8 219 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 SMIM4Q8WVI0 70 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 GPR146Q96CH1 333 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 PRRT1Q99946 306 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 SAV1Q9H4B6 383 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-212ENST00000529046 NAA60Q9H7X0 242 aa3.02□□□□□ -1.93
CSDE1-212ENST00000529046 C14orf166Q9Y224 244 aaKnown RBP3.02□□□□□ -1.93
CSDE1-212ENST00000529046 IGHV3-66A0A0C4DH42 116 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 PITX3O75364 302 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 IFNA21P01568 189 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 OR5AC1P0C628 307 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 AKAIN1P0CW23 69 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 SULT1A3P0DMM9 295 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 SULT1A4P0DMN0 295 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 TSPOP30536 169 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 S100A7P31151 101 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 SUPT4H1P63272 117 aaKnown RBP3.01□□□□□ -1.93
CSDE1-212ENST00000529046 SMCO1Q147U7 214 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 SCGB2B2Q4G0G5 96 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 SPINK9Q5DT21 86 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-212ENST00000529046 TMEM252Q8N6L7 170 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 ZNF709Q8N972 641 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 RNASE11Q8TAA1 199 aaKnown RBP3.01□□□□□ -1.93
CSDE1-212ENST00000529046 TMEM101Q96IK0 257 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 GPR82Q96P67 336 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 TRGV9Q99603 122 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 NAA50Q9GZZ1 169 aaKnown RBP3.01□□□□□ -1.93
CSDE1-212ENST00000529046 CCDC59Q9P031 241 aaKnown RBP3.01□□□□□ -1.93
CSDE1-212ENST00000529046 RSL24D1Q9UHA3 163 aaKnown RBP3.01□□□□□ -1.93
CSDE1-212ENST00000529046 SCP2D1Q9UJQ7 156 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 RCL1Q9Y2P8 373 aaKnown RBP3.01□□□□□ -1.93
CSDE1-212ENST00000529046 RFNGQ9Y644 331 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 RYR1P21817 5038 aa3.01□□□□□ -1.93
CSDE1-212ENST00000529046 IGKV1D-37A0A075B6S9 117 aa3□□□□□ -1.93
CSDE1-212ENST00000529046 A0A0J9YX75 114 aa3□□□□□ -1.93
CSDE1-212ENST00000529046 A0A0J9YXY3 114 aa3□□□□□ -1.93
CSDE1-212ENST00000529046 ANKRD20A5PA0PJZ0 165 aa3□□□□□ -1.93
CSDE1-212ENST00000529046 CEBPZOSA8MTT3 80 aa3□□□□□ -1.93
CSDE1-212ENST00000529046 SNAPINO95295 136 aa3□□□□□ -1.93
CSDE1-212ENST00000529046 IFNA10P01566 189 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms