RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 A0A1B0GUT8 65 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 PSMB11A5LHX3 300 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 PGPA6NDG6 321 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 A6NDN8 102 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 RPL37AP8A6NKH3 93 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 SIVA1O15304 175 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 FOXH1O75593 365 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 LTAP01374 205 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 IGLV2-8P01709 118 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 HNF1AP20823 631 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 BMI1P35226 326 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 MYCNOSP40205 109 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 GNG10P50151 68 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 HIST1H1AQ02539 215 aaPredicted RBP3.73□□□□□ -1.81
CD44-230ENST00000528922 SAPCD1Q5SSQ6 148 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 SPATA31B1PQ5VZV4 182 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 RNASEKQ6P5S7 137 aaKnown RBP3.73□□□□□ -1.81
CD44-230ENST00000528922 Q6ZS92 163 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 GTF2H5Q6ZYL4 71 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 SMIM15Q7Z3B0 74 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 C11orf42Q8N5U0 333 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 TMEM75Q8N9X5 138 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 FAM57AQ8TBR7 257 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 FAM167A-AS1Q96KT0 104 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 RASL11BQ9BPW5 248 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 SLC25A2Q9BXI2 301 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 RNASE7Q9H1E1 156 aaKnown RBP3.73□□□□□ -1.81
CD44-230ENST00000528922 ZNF835Q9Y2P0 537 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 UTP20O75691 2785 aaKnown RBP3.73□□□□□ -1.81
CD44-230ENST00000528922 NF1P21359 2839 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 NAV3Q8IVL0 2385 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 ABCA2Q9BZC7 2435 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 PLCE1Q9P212 2302 aa3.73□□□□□ -1.81
CD44-230ENST00000528922 F8P00451 2351 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 IGHV3OR15-7A0A075B7D8 119 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 A0A1B0GXF2 115 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 OR4C46A6NHA9 309 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 LINC01549A6NIU2 74 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 OOSP1A8MZH6 123 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 K7EM74 188 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 K7ERU9 68 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 CD5LO43866 347 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 PPBPP02775 128 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 TCRAP04437 139 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 G0S2P27469 103 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 HTR1DP28221 377 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 FXYD3Q14802 87 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 BATFQ16520 125 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 PRSS8Q16651 343 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 C9orf66Q5T8R8 295 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 FA2HQ7L5A8 372 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 PPP1R27Q86WC6 154 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 NIT1Q86X76 327 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 MUC15Q8N387 334 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 GATD1Q8NB37 220 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 OR4C5Q8NGB2 326 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 OR9G4Q8NGQ1 327 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 OR1B1Q8NGR6 318 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 FXYD5Q96DB9 178 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 RCHY1Q96PM5 261 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 CCL13Q99616 98 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 TMEM133Q9H2Q1 129 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 DYNLRB1Q9NP97 96 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 ASCL3Q9NQ33 180 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 PEF1Q9UBV8 284 aaKnown RBP3.72□□□□□ -1.81
CD44-230ENST00000528922 TP53TG3Q9ULZ0 132 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 FZR1Q9UM11 496 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 INSIG2Q9Y5U4 225 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 F11RQ9Y624 299 aaKnown RBP3.72□□□□□ -1.81
CD44-230ENST00000528922 PRR14LQ5THK1 2151 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 MED13LQ71F56 2210 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 LRRK2Q5S007 2527 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 CADP27708 2225 aa3.72□□□□□ -1.81
CD44-230ENST00000528922 NOTCH3Q9UM47 2321 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 LAMA1P25391 3075 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 IGKV1OR2-108A0A075B7D4 117 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 LOC102724200A0A096LPH7 203 aaPredicted RBP3.71□□□□□ -1.81
CD44-230ENST00000528922 IGHV3-64DA0A0J9YX35 117 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 C19orf71A6NCJ1 209 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 SYS1-DBNDD2H3BUS1 97 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 K7EP13 123 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 NUPR1O60356 82 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 IGKV1-16P04430 117 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 IGHV1-8P0DP01 117 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 DEFA4P12838 97 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 RPL7P18124 248 aaKnown RBP3.71□□□□□ -1.81
CD44-230ENST00000528922 ORM2P19652 201 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 TCL1AP56279 114 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 TNXAQ16473 311 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 ECSCRQ19T08 205 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 DEFB109BQ30KR1 87 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 TMEM155Q4W5P6 130 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 BOD1L2Q8IYS8 172 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 RPRMLQ8N4K4 120 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 DEFB108BQ8NET1 73 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 OR4X2Q8NGF9 303 aa3.71□□□□□ -1.81
CD44-230ENST00000528922 H1FXQ92522 213 aaKnown RBP3.71□□□□□ -1.81
CD44-230ENST00000528922 RPEQ96AT9 228 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms