RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 BCL2L11O43521 198 aa11.88□□□□□ -0.51
HIF3A-211ENST00000528563 SEC11BP0C7V7 166 aa11.88□□□□□ -0.51
HIF3A-211ENST00000528563 GSN-AS1Q9NRJ2 163 aa11.88□□□□□ -0.51
HIF3A-211ENST00000528563 IGHV1OR15-1A0A075B7D0 117 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 TRAV8-1A0A0A6YYK1 113 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 SERTM2A0A1B0GWG4 89 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 KANTRA0A1W2PQU2 76 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 A0A1W2PRE2 83 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 SNURFLB1AK76 121 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 RGS13O14921 159 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 TCRAP04437 139 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 Q6AWC8 147 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 TCTE3Q8IZS6 198 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 ZNF680Q8NEM1 530 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
HIF3A-211ENST00000528563 ATP5G1P05496 136 aa11.86□□□□□ -0.51
HIF3A-211ENST00000528563 ATP5G3P48201 142 aa11.86□□□□□ -0.51
HIF3A-211ENST00000528563 FHITP49789 147 aa11.86□□□□□ -0.51
HIF3A-211ENST00000528563 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-211ENST00000528563 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
HIF3A-211ENST00000528563 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-211ENST00000528563 TP53TG3Q9ULZ0 132 aa11.86□□□□□ -0.51
HIF3A-211ENST00000528563 IGLV2-11P01706 119 aa11.85□□□□□ -0.51
HIF3A-211ENST00000528563 TMEM88Q6PEY1 159 aa11.85□□□□□ -0.51
HIF3A-211ENST00000528563 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 MAP1LC3B2A6NCE7 125 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 UMAD1C9J7I0 102 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 LGALSLQ3ZCW2 172 aaPredicted RBP11.84□□□□□ -0.51
HIF3A-211ENST00000528563 IBA57Q5T440 356 aaKnown RBP11.84□□□□□ -0.51
HIF3A-211ENST00000528563 Q6ZTI0 123 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 TREM1Q9NP99 234 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 KLF12Q9Y4X4 402 aa11.84□□□□□ -0.51
HIF3A-211ENST00000528563 GAGE12BA1L429 117 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 F5H768 121 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 K7EQM0 130 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 GAGE7O76087 117 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 GAGE12FP0CL80 117 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 GAGE12GP0CL81 117 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 GAGE12IP0CL82 117 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 TCL1AP56279 114 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
HIF3A-211ENST00000528563 MBD3L1Q8WWY6 194 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 NKX6-2Q9C056 277 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-211ENST00000528563 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 PFDN1O60925 122 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 P0DMU3 169 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 FAM231AP0DMU4 169 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 FAM231CP0DMU5 169 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 UBE2G2P60604 165 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 MUC21Q5SSG8 566 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 CYB561D1Q8N8Q1 229 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 ATG101Q9BSB4 218 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 PSG8Q9UQ74 426 aa11.83□□□□□ -0.52
HIF3A-211ENST00000528563 SPINK4O60575 86 aa11.82□□□□□ -0.52
HIF3A-211ENST00000528563 C1QBP02746 253 aa11.82□□□□□ -0.52
HIF3A-211ENST00000528563 TDRG1Q3Y452 100 aa11.82□□□□□ -0.52
HIF3A-211ENST00000528563 STOML3Q8TAV4 291 aa11.82□□□□□ -0.52
HIF3A-211ENST00000528563 C18orf15Q96N68 181 aa11.82□□□□□ -0.52
HIF3A-211ENST00000528563 FBLL1A6NHQ2 334 aaKnown RBP11.81□□□□□ -0.52
HIF3A-211ENST00000528563 IFNA7P01567 189 aa11.81□□□□□ -0.52
HIF3A-211ENST00000528563 TPT1P13693 172 aaKnown RBP11.81□□□□□ -0.52
HIF3A-211ENST00000528563 FLI1Q01543 452 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-211ENST00000528563 FAM159AQ6UWV7 190 aa11.81□□□□□ -0.52
HIF3A-211ENST00000528563 DPPA3Q6W0C5 159 aa11.81□□□□□ -0.52
HIF3A-211ENST00000528563 POM121L12Q8N7R1 296 aa11.81□□□□□ -0.52
HIF3A-211ENST00000528563 TMEM75Q8N9X5 138 aa11.81□□□□□ -0.52
HIF3A-211ENST00000528563 LINC00479Q96M42 142 aa11.81□□□□□ -0.52
HIF3A-211ENST00000528563 MDFICQ9P1T7 246 aa11.81□□□□□ -0.52
HIF3A-211ENST00000528563 TRAV21A0A0B4J279 112 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 F6UZH7 168 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 LGALS9BQ3B8N2 356 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 FAM213BQ8TBF2 198 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 SFT2D1Q8WV19 159 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 C8orf49Q96NF6 230 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 NDFIP1Q9BT67 221 aa11.8□□□□□ -0.52
HIF3A-211ENST00000528563 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 hCG_2014768A0A024R1R8 64 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 TRGV1A0A0A0MS02 117 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 HOXA5P20719 270 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
HIF3A-211ENST00000528563 TMEM183BQ1AE95 376 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 SAPCD1Q5SSQ6 148 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 PRNTQ86SH4 94 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 TMEM183AQ8IXX5 376 aa11.79□□□□□ -0.52
HIF3A-211ENST00000528563 TRAV34A0A0B4J273 112 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 GNRH2O43555 120 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 ZNF415Q09FC8 603 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 OR5I1Q13606 314 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 AKAP14Q86UN6 197 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 HIST1H2BAQ96A08 127 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 MUC4Q99102 2169 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 KMT2AQ03164 3969 aa11.78□□□□□ -0.52
HIF3A-211ENST00000528563 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.52
HIF3A-211ENST00000528563 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.52
HIF3A-211ENST00000528563 PEX7O00628 323 aa11.77□□□□□ -0.52
HIF3A-211ENST00000528563 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms