RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 GAGE12GP0CL81 117 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 GAGE12IP0CL82 117 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 GCHFRP30047 84 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 TCL1AP56279 114 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 FAM3BP58499 235 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 Q6AWC8 147 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 UBE2DNLQ8IWF7 75 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 SH3BGRL3Q9H299 93 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 GSN-AS1Q9NRJ2 163 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 TMEM167BQ9NRX6 74 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 NACAE9PAV3 2078 aa8.5□□□□□ -1.05
TRAPPC4-209ENST00000528230 ARPC5O15511 151 aa8.49□□□□□ -1.05
TRAPPC4-209ENST00000528230 SPINK4O60575 86 aa8.49□□□□□ -1.05
TRAPPC4-209ENST00000528230 LGALS9BQ3B8N2 356 aa8.49□□□□□ -1.05
TRAPPC4-209ENST00000528230 H3BNG1 76 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 Q6ZQT7 251 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 Q6ZTI0 123 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 C5orf17Q8NAS9 161 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 ARPC5LQ9BPX5 153 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 CYTL1Q9NRR1 136 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 TP53TG3Q9ULZ0 132 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
TRAPPC4-209ENST00000528230 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 TRGV2A0A075B6R0 118 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 CTXND1A0A1B0GTU2 59 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 A0A1W2PRE2 83 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 HMSDA8MTL9 139 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 K7EQM0 130 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 NUDT3O95989 172 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 TCRAP04437 139 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 HOXA5P20719 270 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 ZNF415Q09FC8 603 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 OR5I1Q13606 314 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 ZNF345Q14585 488 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 TDRG1Q3Y452 100 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
TRAPPC4-209ENST00000528230 MUC4Q99102 2169 aa8.46□□□□□ -1.05
TRAPPC4-209ENST00000528230 TRAV26-1A0A087WT03 109 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 TRGV1A0A0A0MS02 117 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 CCL18P55774 89 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 GNG5P63218 68 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 AKR1C8PQ5T2L2 129 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 FAM159AQ6UWV7 190 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 KCNRGQ8N5I3 272 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 TVP23CQ96ET8 276 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 ATG101Q9BSB4 218 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 SPXQ9BT56 116 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 TREM1Q9NP99 234 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 EPDR1Q9UM22 224 aa8.46□□□□□ -1.06
TRAPPC4-209ENST00000528230 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 TRAV8-1A0A0A6YYK1 113 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 TRAV21A0A0B4J279 112 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 ZNF726P1Q15940 193 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 MUC21Q5SSG8 566 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 Q6ZR54 194 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 LINC00336Q6ZUF6 198 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 NDFIP1Q9BT67 221 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 NKX6-2Q9C056 277 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 TMPRSS5Q9H3S3 457 aa8.45□□□□□ -1.06
TRAPPC4-209ENST00000528230 A0A0D9SG52 128 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 GGTLC3B5MD39 225 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 SMLR1H3BR10 107 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 SLAQ13239 276 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 CYB561D1Q8N8Q1 229 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 RASL10AQ92737 203 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 KCNS1Q96KK3 526 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 MDFICQ9P1T7 246 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 PSG8Q9UQ74 426 aa8.44□□□□□ -1.06
TRAPPC4-209ENST00000528230 A0A0J9YY99 117 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 M0R2N4 97 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 IGLV2-11P01706 119 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 FLI1Q01543 452 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 TMEM183BQ1AE95 376 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 SAPCD1Q5SSQ6 148 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 IQCF2Q8IXL9 164 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 OR11H4Q8NGC9 324 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 MRPL16Q9NX20 251 aaKnown RBP8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 LINC00588Q9Y4M8 146 aa8.43□□□□□ -1.06
TRAPPC4-209ENST00000528230 IGLV2-18A0A075B6J9 118 aa8.42□□□□□ -1.06
TRAPPC4-209ENST00000528230 F6UZH7 168 aa8.42□□□□□ -1.06
TRAPPC4-209ENST00000528230 SEC11BP0C7V7 166 aa8.42□□□□□ -1.06
TRAPPC4-209ENST00000528230 STOML3Q8TAV4 291 aa8.42□□□□□ -1.06
TRAPPC4-209ENST00000528230 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
TRAPPC4-209ENST00000528230 SGK494Q96LW2 274 aa8.42□□□□□ -1.06
TRAPPC4-209ENST00000528230 SDF2L1Q9HCN8 221 aa8.42□□□□□ -1.06
TRAPPC4-209ENST00000528230 IGHV3-16A0A0C4DH30 117 aa8.41□□□□□ -1.06
TRAPPC4-209ENST00000528230 KANTRA0A1W2PQU2 76 aa8.41□□□□□ -1.06
TRAPPC4-209ENST00000528230 MAP1LC3B2A6NCE7 125 aa8.41□□□□□ -1.06
TRAPPC4-209ENST00000528230 FAM74A7A6NL05 159 aa8.41□□□□□ -1.06
TRAPPC4-209ENST00000528230 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
TRAPPC4-209ENST00000528230 GNRH2O43555 120 aa8.41□□□□□ -1.06
TRAPPC4-209ENST00000528230 PPT1P50897 306 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms