RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ARL14EPLP0DKL9 152 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 DEFB130BP0DP73 79 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 DEFB130AP0DP74 79 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 AZU1P20160 251 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 ATP5G3P48201 142 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 TOR2AQ5JU69 321 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 SOHLH1Q5JUK2 328 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 MIR17HGQ75NE6 70 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 FAM167A-AS1Q96KT0 104 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 ODF3Q96PU9 254 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 TMEM14CQ9P0S9 112 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 PDE6DO43924 150 aa10.01□□□□□ -0.81
CAPN1-212ENST00000527887 PRM2P04554 102 aa10.01□□□□□ -0.81
CAPN1-212ENST00000527887 FGF8P55075 233 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-212ENST00000527887 MEF2BQ02080 365 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-212ENST00000527887 ICAM4Q14773 271 aa10.01□□□□□ -0.81
CAPN1-212ENST00000527887 Q6ZR54 194 aa10.01□□□□□ -0.81
CAPN1-212ENST00000527887 CCDC28AQ8IWP9 274 aa10.01□□□□□ -0.81
CAPN1-212ENST00000527887 TMEM263Q8WUH6 116 aaKnown RBP10.01□□□□□ -0.81
CAPN1-212ENST00000527887 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
CAPN1-212ENST00000527887 TCEAL7Q9BRU2 100 aa10.01□□□□□ -0.81
CAPN1-212ENST00000527887 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
CAPN1-212ENST00000527887 A0A1W2PRE2 83 aa10□□□□□ -0.81
CAPN1-212ENST00000527887 PRSS29PA6NIE9 313 aa10□□□□□ -0.81
CAPN1-212ENST00000527887 H3BQ15 152 aa10□□□□□ -0.81
CAPN1-212ENST00000527887 M0R2N4 97 aa10□□□□□ -0.81
CAPN1-212ENST00000527887 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
CAPN1-212ENST00000527887 MORN5Q5VZ52 161 aa10□□□□□ -0.81
CAPN1-212ENST00000527887 RNASE8Q8TDE3 154 aaKnown RBP10□□□□□ -0.81
CAPN1-212ENST00000527887 OR51M1Q9H341 326 aa10□□□□□ -0.81
CAPN1-212ENST00000527887 PRELID1Q9Y255 219 aa10□□□□□ -0.81
CAPN1-212ENST00000527887 A0A1B0GV50 99 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 F5H768 121 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 SLC17A3O00476 420 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 RTL8CO15255 209 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 OR7C2O60412 319 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 HTN1P15515 57 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 LEPP41159 167 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 PDE6HQ13956 83 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 FAM74A3Q4VXF1 159 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 ZNF503Q96F45 646 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 ATG101Q9BSB4 218 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 SLC25A2Q9BXI2 301 aa9.99□□□□□ -0.81
CAPN1-212ENST00000527887 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 A0A1B0GVY2 172 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 PRAC2D3DTV9 90 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 F6UZH7 168 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 HMGB3O15347 200 aaKnown RBP9.98□□□□□ -0.81
CAPN1-212ENST00000527887 PAGE4O60829 102 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 SRP19P09132 144 aaKnown RBP9.98□□□□□ -0.81
CAPN1-212ENST00000527887 SNRPCP09234 159 aaKnown RBP9.98□□□□□ -0.81
CAPN1-212ENST00000527887 SFTA3P0C7M3 94 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 HIST1H1EP10412 219 aaKnown RBP9.98□□□□□ -0.81
CAPN1-212ENST00000527887 TMPRSS5Q9H3S3 457 aa9.98□□□□□ -0.81
CAPN1-212ENST00000527887 IGLV2-18A0A075B6J9 118 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 TRAV5A0A0B4J249 113 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 FAM74A7A6NL05 159 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 C9JQL5 133 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 F8W036 122 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 CCL18P55774 89 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 GFI1BQ5VTD9 330 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 LYPD1Q8N2G4 141 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 SVBPQ8N300 66 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 RXFP4Q8TDU9 374 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 PYGO2Q9BRQ0 406 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 NOP10Q9NPE3 64 aaKnown RBP9.97□□□□□ -0.81
CAPN1-212ENST00000527887 ZNF586Q9NXT0 402 aa9.97□□□□□ -0.81
CAPN1-212ENST00000527887 H3BTX0 84 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 SLC25A5P05141 298 aaKnown RBP9.96□□□□□ -0.82
CAPN1-212ENST00000527887 NBEAP1P0C6P0 100 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 CT45A10P0DMU9 189 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 UBE2L3P68036 154 aaKnown RBP9.96□□□□□ -0.82
CAPN1-212ENST00000527887 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 IQCF2Q8IXL9 164 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 ARL6IP6Q8N6S5 226 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 LINC00612Q8N6U2 182 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 FXYD5Q96DB9 178 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 PKHD1P08F94 4074 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 PKD1P98161 4303 aa9.96□□□□□ -0.82
CAPN1-212ENST00000527887 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
CAPN1-212ENST00000527887 NUDT3O95989 172 aa9.95□□□□□ -0.82
CAPN1-212ENST00000527887 DAZ2Q13117 558 aaKnown RBP9.95□□□□□ -0.82
CAPN1-212ENST00000527887 C11orf52Q96A22 123 aa9.95□□□□□ -0.82
CAPN1-212ENST00000527887 AAMDCQ9H7C9 122 aa9.95□□□□□ -0.82
CAPN1-212ENST00000527887 KIAA1109Q2LD37 5005 aa9.94□□□□□ -0.82
CAPN1-212ENST00000527887 MED14OSP0DP75 135 aa9.94□□□□□ -0.82
CAPN1-212ENST00000527887 ADCYAP1P18509 176 aa9.94□□□□□ -0.82
CAPN1-212ENST00000527887 PNRC1Q12796 327 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-212ENST00000527887 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
CAPN1-212ENST00000527887 CST9LP1Q5W188 147 aa9.94□□□□□ -0.82
CAPN1-212ENST00000527887 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
CAPN1-212ENST00000527887 TRAV12-3A0A0B4J271 114 aa9.93□□□□□ -0.82
CAPN1-212ENST00000527887 H3BNG1 76 aa9.93□□□□□ -0.82
CAPN1-212ENST00000527887 NDUFB4O95168 129 aa9.93□□□□□ -0.82
CAPN1-212ENST00000527887 SNAPINO95295 136 aa9.93□□□□□ -0.82
CAPN1-212ENST00000527887 APOC3P02656 99 aa9.93□□□□□ -0.82
CAPN1-212ENST00000527887 CYB561D1Q8N8Q1 229 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms