RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 MBP02144 154 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 ORM2P19652 201 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 CDC34P49427 236 aaPredicted RBP3.97□□□□□ -1.77
VPS26B-204ENST00000527586 BCAP31P51572 246 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 CYCSP99999 105 aaKnown RBP3.97□□□□□ -1.77
VPS26B-204ENST00000527586 GAGE1Q13065 139 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 GAGE4Q13068 117 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 GAGE5Q13069 117 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 GAGE13Q4V321 117 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 KRTAP26-1Q6PEX3 210 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 DHRSXQ8N5I4 330 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 C15orf54Q8N8G6 183 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 DTD1Q8TEA8 209 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 TMEM170AQ8WVE7 144 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 GFRA4Q9GZZ7 299 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 C20orf85Q9H1P6 137 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 DIABLOQ9NR28 239 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 LINC00474Q9P2X8 69 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 NAGKQ9UJ70 344 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 SLC45A2Q9UMX9 530 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 A0A087X0K7 114 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 IGHV3-73A0A0B4J1V6 119 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 HOXB6P17509 224 aaKnown RBP3.96□□□□□ -1.78
VPS26B-204ENST00000527586 RPL7P18124 248 aaKnown RBP3.96□□□□□ -1.78
VPS26B-204ENST00000527586 TAS2R20P59543 309 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 HERV-K104P61576 105 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 GNGT1P63211 74 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 SRPXP78539 464 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 PRR27Q6MZM9 219 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 FAM219AQ8IW50 185 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 SELENOHQ8IZQ5 122 aaKnown RBP3.96□□□□□ -1.78
VPS26B-204ENST00000527586 LGI3Q8N145 548 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.96□□□□□ -1.78
VPS26B-204ENST00000527586 ALKBH7Q9BT30 221 aaPredicted RBP3.96□□□□□ -1.78
VPS26B-204ENST00000527586 TMEM147Q9BVK8 224 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 SAMD10Q9BYL1 202 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 GABARAPL1Q9H0R8 117 aa3.96□□□□□ -1.78
VPS26B-204ENST00000527586 HEYLQ9NQ87 328 aaPredicted RBP3.96□□□□□ -1.78
VPS26B-204ENST00000527586 AK6Q9Y3D8 172 aaKnown RBP3.96□□□□□ -1.78
VPS26B-204ENST00000527586 RAB19A4D1S5 217 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 TMEM262E9PQX1 116 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 GABARAPH6UMI1 98 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 GABARAPO95166 117 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 GPX1P07203 203 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 GNAO1P09471 354 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 RPS10P46783 165 aaKnown RBP3.95□□□□□ -1.78
VPS26B-204ENST00000527586 ARL6IP1Q15041 203 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 MIAQ16674 131 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 AQP12AQ8IXF9 295 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 BEST4Q8NFU0 473 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 LHFPL5Q8TAF8 219 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 GPX8Q8TED1 209 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 CCDC124Q96CT7 223 aaKnown RBP3.95□□□□□ -1.78
VPS26B-204ENST00000527586 NUDT11Q96G61 164 aa3.95□□□□□ -1.78
VPS26B-204ENST00000527586 RPP21Q9H633 154 aaKnown RBP3.95□□□□□ -1.78
VPS26B-204ENST00000527586 ZNF331Q9NQX6 463 aaPredicted RBP3.95□□□□□ -1.78
VPS26B-204ENST00000527586 ANKRD65E5RJM6 399 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 H3BRN7 92 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 ZNF561-AS1K7EIQ3 104 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 TNFAIP8O95379 198 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 IGKV1-5P01602 117 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 ANGP03950 147 aaKnown RBP3.94□□□□□ -1.78
VPS26B-204ENST00000527586 CD1AP06126 327 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 SNRPCP09234 159 aaKnown RBP3.94□□□□□ -1.78
VPS26B-204ENST00000527586 LINC00694P0DN24 101 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 MYL12AP19105 171 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 G0S2P27469 103 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 S100A7P31151 101 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 GNG2P59768 71 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 ERCC8Q13216 396 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 TRIM16LQ309B1 348 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 KRTAP13-3Q3SY46 172 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 PHLDA2Q53GA4 152 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 MUC21Q5SSG8 566 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 C1orf146Q5VVC0 180 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 ZNF485Q8NCK3 441 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 RAB24Q969Q5 203 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 TRGV9Q99603 122 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 SLC50A1Q9BRV3 221 aa3.94□□□□□ -1.78
VPS26B-204ENST00000527586 METTL21EPA6NDL7 271 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 M0R2P5 195 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 GPR31O00270 319 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 ZNF253O75346 499 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 CFDP00746 253 aaPredicted RBP3.93□□□□□ -1.78
VPS26B-204ENST00000527586 AP3S2P59780 193 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 UBE2G2P60604 165 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 RAB11AP62491 216 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 EIF5AP63241 154 aaKnown RBP3.93□□□□□ -1.78
VPS26B-204ENST00000527586 ZNF876PQ49A33 203 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 PRR9Q5T870 116 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 GGNBP1Q5YKI7 109 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 SHANK2-AS3Q9BTD1 123 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 ATG5Q9H1Y0 275 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 GEMIN7Q9H840 131 aaKnown RBP3.93□□□□□ -1.78
VPS26B-204ENST00000527586 VCX3AQ9NNX9 186 aa3.93□□□□□ -1.78
VPS26B-204ENST00000527586 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
VPS26B-204ENST00000527586 MEIS3P1A6NDR6 274 aa3.92□□□□□ -1.78
VPS26B-204ENST00000527586 PCP4L1A6NKN8 68 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms