RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 FOXA3P55318 350 aaPredicted RBP12.38□□□□□ -0.43
SNRNP35-204ENST00000527158 SAPCD1Q5SSQ6 148 aa12.38□□□□□ -0.43
SNRNP35-204ENST00000527158 C8orf86Q6ZUL3 223 aa12.38□□□□□ -0.43
SNRNP35-204ENST00000527158 TMEM70Q9BUB7 260 aa12.38□□□□□ -0.43
SNRNP35-204ENST00000527158 CLEC5AQ9NY25 188 aa12.38□□□□□ -0.43
SNRNP35-204ENST00000527158 K7EMT4 169 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 CRXO43186 299 aaPredicted RBP12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 CT45A10P0DMU9 189 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 TCF24Q7RTU0 167 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 ZC2HC1AQ96GY0 325 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 UBE2E2Q96LR5 201 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 LAMTOR2Q9Y2Q5 125 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 IGHV7-4-1A0A0J9YVY3 117 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 RNF182Q8N6D2 247 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 C16orf92Q96LL3 132 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 UNC79Q9P2D8 2635 aa12.37□□□□□ -0.43
SNRNP35-204ENST00000527158 C2orf70A6NJV1 201 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 LGALS1P09382 135 aaKnown RBP12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 SCGB2A2Q13296 93 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 TM4SF20Q53R12 229 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 Q6AWC8 147 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 RNF152Q8N8N0 203 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 MYOZ3Q8TDC0 251 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 GTSF1Q8WW33 167 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 MRPL53Q96EL3 112 aaKnown RBP12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 SSBP4Q9BWG4 385 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 UFC1Q9Y3C8 167 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 RBAKDNA6NC62 111 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 DNAJC9-AS1A6NH13 148 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 BATFQ16520 125 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 EBLN2Q6P2I7 272 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 PGLYRP4Q96LB8 373 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 ASCL2Q99929 193 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 VGLL1Q99990 258 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 RHPN1-AS1Q9BWJ2 59 aa12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 GCN1Q92616 2671 aaKnown RBP12.36□□□□□ -0.43
SNRNP35-204ENST00000527158 MXRA5Q9NR99 2828 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 TRAV8-2A0A0B4J237 113 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 GATD1Q8NB37 220 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 SMPXQ9UHP9 88 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 TSPOP30536 169 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 RIGQ13278 110 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 C8orf49Q96NF6 230 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 PRR25Q96S07 402 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 PPP1R14DQ9NXH3 145 aa12.35□□□□□ -0.43
SNRNP35-204ENST00000527158 FLNAP21333 2647 aaKnown RBP12.34□□□□□ -0.43
SNRNP35-204ENST00000527158 BMI1P35226 326 aa12.34□□□□□ -0.43
SNRNP35-204ENST00000527158 Q71RC1 249 aaPredicted RBP12.34□□□□□ -0.43
SNRNP35-204ENST00000527158 ST20Q9HBF5 79 aa12.34□□□□□ -0.43
SNRNP35-204ENST00000527158 ZNF469Q96JG9 3925 aaPredicted RBP12.34□□□□□ -0.43
SNRNP35-204ENST00000527158 COX8CQ7Z4L0 72 aa12.33□□□□□ -0.44
SNRNP35-204ENST00000527158 ITPR2Q14571 2701 aa12.33□□□□□ -0.44
SNRNP35-204ENST00000527158 PRAC2D3DTV9 90 aa12.33□□□□□ -0.44
SNRNP35-204ENST00000527158 A0A1B0GUT8 65 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 LEPROTL1O95214 131 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 CRIP1P50238 77 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 Q8TAT8 98 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 ORAOV1Q8WV07 137 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 TMEM191AQ9H0A3 160 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 HSPB8Q9UJY1 196 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 ERCC8Q13216 396 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 PET117Q6UWS5 81 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 Q6ZSV7 163 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
SNRNP35-204ENST00000527158 SYS1-DBNDD2H3BUS1 97 aa12.31□□□□□ -0.44
SNRNP35-204ENST00000527158 TMEM160Q9NX00 188 aa12.31□□□□□ -0.44
SNRNP35-204ENST00000527158 IGHV4OR15-8A0A075B7B6 117 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 A0A087WW49 117 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 IGHV1-24A0A0C4DH33 117 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 TMEM78Q5T7P6 136 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 MAP1LC3CQ9BXW4 147 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 ESM1Q9NQ30 184 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 TLN2Q9Y4G6 2542 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 HSBP1L1C9JCN9 74 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 LGALS9O00182 355 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 ZNF738Q8NE65 137 aa12.3□□□□□ -0.44
SNRNP35-204ENST00000527158 OR4C46A6NHA9 309 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 SOCS3O14543 225 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 SH2D1AO60880 128 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 IGLL1P15814 213 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 HOXD3P31249 432 aaPredicted RBP12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 SYNJ2BPP57105 145 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 AGPAT4-IT1Q9H0P7 198 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 IGKV3-7A0A075B6H7 116 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 TMEM213A2RRL7 107 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 ZNF138P52744 262 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 SAMD13Q5VXD3 122 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 C9orf47Q6ZRZ4 202 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 ATOH7Q8N100 152 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 STPG4Q8N801 248 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 MS4A6AQ9H2W1 248 aa12.29□□□□□ -0.44
SNRNP35-204ENST00000527158 TMEM189A5PLL7 270 aa12.28□□□□□ -0.44
SNRNP35-204ENST00000527158 SRD5A1P18405 259 aa12.28□□□□□ -0.44
SNRNP35-204ENST00000527158 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
SNRNP35-204ENST00000527158 C20orf173Q96LM9 149 aa12.28□□□□□ -0.44
SNRNP35-204ENST00000527158 OVOL1O14753 267 aa12.28□□□□□ -0.44
SNRNP35-204ENST00000527158 NPSP0C0P6 89 aa12.28□□□□□ -0.44
SNRNP35-204ENST00000527158 FABP5P3A8MUU1 101 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms