RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 STAG3L2P0CL84 134 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 STAG3L3P0CL85 134 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 TCL1AP56279 114 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 Q8TAT8 98 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 GNPNAT1Q96EK6 184 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 ATG101Q9BSB4 218 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 NUDT3O95989 172 aa12.91□□□□□ -0.34
TSPAN4-216ENST00000526055 PRR9Q5T870 116 aa12.91□□□□□ -0.34
TSPAN4-216ENST00000526055 Q6AWC8 147 aa12.91□□□□□ -0.34
TSPAN4-216ENST00000526055 KCNRGQ8N5I3 272 aa12.91□□□□□ -0.34
TSPAN4-216ENST00000526055 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
TSPAN4-216ENST00000526055 DNAH10Q8IVF4 4471 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 SERTM2A0A1B0GWG4 89 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 CCL18P55774 89 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 OR5I1Q13606 314 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 RPL7L1Q6DKI1 246 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 Q6ZTI0 123 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 OR11H4Q8NGC9 324 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 SUN5Q8TC36 379 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 RAB24Q969Q5 203 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 HYLS1Q96M11 299 aa12.9□□□□□ -0.34
TSPAN4-216ENST00000526055 TRGV2A0A075B6R0 118 aa12.89□□□□□ -0.35
TSPAN4-216ENST00000526055 KANTRA0A1W2PQU2 76 aa12.89□□□□□ -0.35
TSPAN4-216ENST00000526055 SPINK4O60575 86 aa12.89□□□□□ -0.35
TSPAN4-216ENST00000526055 Q6ZR54 194 aa12.89□□□□□ -0.35
TSPAN4-216ENST00000526055 ACTR3CQ9C0K3 210 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-216ENST00000526055 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
TSPAN4-216ENST00000526055 TRAV26-1A0A087WT03 109 aa12.88□□□□□ -0.35
TSPAN4-216ENST00000526055 TRGV1A0A0A0MS02 117 aa12.88□□□□□ -0.35
TSPAN4-216ENST00000526055 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSPAN4-216ENST00000526055 C1QBP02746 253 aa12.88□□□□□ -0.35
TSPAN4-216ENST00000526055 ZNF415Q09FC8 603 aa12.88□□□□□ -0.35
TSPAN4-216ENST00000526055 GOLT1AQ6ZVE7 132 aa12.88□□□□□ -0.35
TSPAN4-216ENST00000526055 TMEM167BQ9NRX6 74 aa12.88□□□□□ -0.35
TSPAN4-216ENST00000526055 M0R2N4 97 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 PFDN1O60925 122 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 CXorf1O96002 111 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 HOXA5P20719 270 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 GCHFRP30047 84 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 C5orf17Q8NAS9 161 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 SH3BGRL3Q9H299 93 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 TMPRSS5Q9H3S3 457 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 TP53TG3Q9ULZ0 132 aa12.87□□□□□ -0.35
TSPAN4-216ENST00000526055 NACAE9PAV3 2078 aa12.86□□□□□ -0.35
TSPAN4-216ENST00000526055 IGLV2-18A0A075B6J9 118 aa12.86□□□□□ -0.35
TSPAN4-216ENST00000526055 BCL2L11O43521 198 aa12.86□□□□□ -0.35
TSPAN4-216ENST00000526055 EIF5AP63241 154 aaKnown RBP12.86□□□□□ -0.35
TSPAN4-216ENST00000526055 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
TSPAN4-216ENST00000526055 SOHLH1Q5JUK2 328 aa12.86□□□□□ -0.35
TSPAN4-216ENST00000526055 RPH3ALQ9UNE2 315 aa12.86□□□□□ -0.35
TSPAN4-216ENST00000526055 TRGV11A0A075B6L2 103 aa12.85□□□□□ -0.35
TSPAN4-216ENST00000526055 K7EQM0 130 aa12.85□□□□□ -0.35
TSPAN4-216ENST00000526055 FAM159AQ6UWV7 190 aa12.85□□□□□ -0.35
TSPAN4-216ENST00000526055 Q6ZQT7 251 aa12.85□□□□□ -0.35
TSPAN4-216ENST00000526055 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
TSPAN4-216ENST00000526055 SPXQ9BT56 116 aa12.85□□□□□ -0.35
TSPAN4-216ENST00000526055 CYTL1Q9NRR1 136 aa12.85□□□□□ -0.35
TSPAN4-216ENST00000526055 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 FBLL1A6NHQ2 334 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 SLAQ13239 276 aa12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 TMUB2Q71RG4 321 aa12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 NDFIP1Q9BT67 221 aa12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 TREM1Q9NP99 234 aa12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
TSPAN4-216ENST00000526055 MUC4Q99102 2169 aa12.83□□□□□ -0.36
TSPAN4-216ENST00000526055 A0A0J9YY99 117 aa12.83□□□□□ -0.36
TSPAN4-216ENST00000526055 RTL8CO15255 209 aa12.83□□□□□ -0.36
TSPAN4-216ENST00000526055 TCRAP04437 139 aa12.83□□□□□ -0.36
TSPAN4-216ENST00000526055 MUC21Q5SSG8 566 aa12.83□□□□□ -0.36
TSPAN4-216ENST00000526055 CTXND1A0A1B0GTU2 59 aa12.82□□□□□ -0.36
TSPAN4-216ENST00000526055 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
TSPAN4-216ENST00000526055 GNG5P63218 68 aa12.82□□□□□ -0.36
TSPAN4-216ENST00000526055 ZFP69Q49AA0 526 aa12.82□□□□□ -0.36
TSPAN4-216ENST00000526055 AKR1C8PQ5T2L2 129 aa12.82□□□□□ -0.36
TSPAN4-216ENST00000526055 SSX7Q7RTT5 188 aa12.82□□□□□ -0.36
TSPAN4-216ENST00000526055 TRAV8-1A0A0A6YYK1 113 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 SUMO1P63165 101 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 TMEM183BQ1AE95 376 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 C1orf134Q5TEV5 83 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 TMEM183AQ8IXX5 376 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 RASL10AQ92737 203 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 TVP23CQ96ET8 276 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 VSIG2Q96IQ7 327 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 UPK3BQ9BT76 320 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 MDFICQ9P1T7 246 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
TSPAN4-216ENST00000526055 NBDYA0A0U1RRE5 68 aa12.8□□□□□ -0.36
TSPAN4-216ENST00000526055 PRSS29PA6NIE9 313 aa12.8□□□□□ -0.36
TSPAN4-216ENST00000526055 GGTLC3B5MD39 225 aa12.8□□□□□ -0.36
TSPAN4-216ENST00000526055 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms