RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 PRR9Q5T870 116 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 PQLC2Q6ZP29 291 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 CMTM2Q8TAZ6 248 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 TMED6Q8WW62 240 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 ST6GAL2Q96JF0 529 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 UPK3BQ9BT76 320 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 OTORQ9NRC9 128 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 LENEPQ9Y5L5 61 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 ZNF415Q09FC8 603 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 ESRGQ1W209 222 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 ASB13Q8WXK3 278 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 HYLS1Q96M11 299 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 WFDC1Q9HC57 220 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 TP53TG3Q9ULZ0 132 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 MRPS16Q9Y3D3 137 aaKnown RBP8.07□□□□□ -1.12
HIF3A-209ENST00000525854 ALG5Q9Y673 324 aa8.07□□□□□ -1.12
HIF3A-209ENST00000525854 SLAQ13239 276 aa8.06□□□□□ -1.12
HIF3A-209ENST00000525854 ARL6IP6Q8N6S5 226 aa8.06□□□□□ -1.12
HIF3A-209ENST00000525854 VSIG2Q96IQ7 327 aa8.06□□□□□ -1.12
HIF3A-209ENST00000525854 MRPL16Q9NX20 251 aaKnown RBP8.06□□□□□ -1.12
HIF3A-209ENST00000525854 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 A0A1W2PPQ1 181 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 PGPA6NDG6 321 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 PAX4O43316 350 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 RAB2AP61019 212 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 TNP2Q05952 138 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 MUC21Q5SSG8 566 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 Q6AWC8 147 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 Q6ZQT7 251 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 OR10G4Q8NGN3 311 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 OR10G9Q8NGN4 311 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 OR10G7Q8NGN6 311 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 MED28Q9H204 178 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 PRO0255Q9UI72 69 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 ICOSQ9Y6W8 199 aa8.05□□□□□ -1.12
HIF3A-209ENST00000525854 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 A0A096LPF7 62 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 IGHV3-53P01767 116 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 BTF3P20290 206 aaKnown RBP8.04□□□□□ -1.12
HIF3A-209ENST00000525854 Q6ZNX1 250 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 OR2G3Q8NGZ4 309 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 AQP10Q96PS8 301 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 SPXQ9BT56 116 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 RPH3ALQ9UNE2 315 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 MUC4Q99102 2169 aa8.04□□□□□ -1.12
HIF3A-209ENST00000525854 DNAH11Q96DT5 4516 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 PFDN1O60925 122 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 EIF3GO75821 320 aaKnown RBP eCLIP8.03□□□□□ -1.12
HIF3A-209ENST00000525854 MBP02144 154 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 CDC34P49427 236 aaPredicted RBP8.03□□□□□ -1.12
HIF3A-209ENST00000525854 TMEM183BQ1AE95 376 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 TDRG1Q3Y452 100 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 GOLT1AQ6ZVE7 132 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 TMEM183AQ8IXX5 376 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 HSD17B11Q8NBQ5 300 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 PSMG3Q9BT73 122 aaPredicted RBP8.03□□□□□ -1.12
HIF3A-209ENST00000525854 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
HIF3A-209ENST00000525854 TRAV21A0A0B4J279 112 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 TRGV4A0A0C4DH28 118 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 SERTM2A0A1B0GWG4 89 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 HMGB3O15347 200 aaKnown RBP8.02□□□□□ -1.13
HIF3A-209ENST00000525854 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 CRYBA4P53673 196 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 SERF2P84101 59 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 FHL2Q14192 279 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 MRPL23Q16540 153 aaKnown RBP8.02□□□□□ -1.13
HIF3A-209ENST00000525854 ZNF575Q86XF7 245 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 IQCF2Q8IXL9 164 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 RASL10AQ92737 203 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 C8orf49Q96NF6 230 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 TREM1Q9NP99 234 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 MDFICQ9P1T7 246 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 NAGKQ9UJ70 344 aa8.02□□□□□ -1.13
HIF3A-209ENST00000525854 C16orf90A8MZG2 172 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 K7EQM0 130 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 GIPP09681 153 aaPredicted RBP8.01□□□□□ -1.13
HIF3A-209ENST00000525854 STAG3L2P0CL84 134 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 STAG3L3P0CL85 134 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 C5orf17Q8NAS9 161 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 INO80EQ8NBZ0 244 aaPredicted RBP8.01□□□□□ -1.13
HIF3A-209ENST00000525854 RAB24Q969Q5 203 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 KCNS1Q96KK3 526 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 NDFIP1Q9BT67 221 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 KRTAP1-5Q9BYS1 174 aa8.01□□□□□ -1.13
HIF3A-209ENST00000525854 M0R2P5 195 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 SIVA1O15304 175 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 ATP6V0CP27449 155 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 GCHFRP30047 84 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 NEGR1Q7Z3B1 354 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 AKAP14Q86UN6 197 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 PCNPQ8WW12 178 aaKnown RBP8□□□□□ -1.13
HIF3A-209ENST00000525854 KRTAP17-1Q9BYP8 105 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 ACTR3CQ9C0K3 210 aaPredicted RBP8□□□□□ -1.13
HIF3A-209ENST00000525854 SDF2L1Q9HCN8 221 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 TMEM167BQ9NRX6 74 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 TNFSF18Q9UNG2 199 aa8□□□□□ -1.13
HIF3A-209ENST00000525854 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
HIF3A-209ENST00000525854 PKD1P98161 4303 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms