RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 MAP1LC3BQ9GZQ8 125 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 APLNQ9ULZ1 77 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 TEX48A0A1B0GUV7 120 aa8.46□□□□□ -1.06
CLN8-207ENST00000524258 GPX1P07203 203 aa8.46□□□□□ -1.06
CLN8-207ENST00000524258 TPT1P13693 172 aaKnown RBP8.46□□□□□ -1.06
CLN8-207ENST00000524258 ANXA2RQ3ZCQ2 193 aa8.46□□□□□ -1.06
CLN8-207ENST00000524258 FAM74A1Q5RGS3 127 aa8.46□□□□□ -1.06
CLN8-207ENST00000524258 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
CLN8-207ENST00000524258 C16orf74Q96GX8 76 aa8.46□□□□□ -1.06
CLN8-207ENST00000524258 KLK5Q9Y337 293 aaPredicted RBP8.46□□□□□ -1.06
CLN8-207ENST00000524258 DEFB131BA0A096LNP1 70 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 SERTM2A0A1B0GWG4 89 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 PFDN1O60925 122 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 HTN1P15515 57 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 EIF5AP63241 154 aaKnown RBP8.45□□□□□ -1.06
CLN8-207ENST00000524258 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 C2CD4CQ8TF44 421 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 LINC00476Q8WZB0 136 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 SGK494Q96LW2 274 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 LINC00479Q96M42 142 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 TP53TG3Q9ULZ0 132 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 RPH3ALQ9UNE2 315 aa8.45□□□□□ -1.06
CLN8-207ENST00000524258 TIMM8BQ9Y5J9 83 aaPredicted RBP8.45□□□□□ -1.06
CLN8-207ENST00000524258 ZNF80P51504 273 aaPredicted RBP8.44□□□□□ -1.06
CLN8-207ENST00000524258 UBE2G2P60604 165 aa8.44□□□□□ -1.06
CLN8-207ENST00000524258 DAZ2Q13117 558 aaKnown RBP8.44□□□□□ -1.06
CLN8-207ENST00000524258 SLC51BQ86UW2 128 aa8.44□□□□□ -1.06
CLN8-207ENST00000524258 EIF4E3Q8N5X7 224 aaKnown RBP8.44□□□□□ -1.06
CLN8-207ENST00000524258 FAM213BQ8TBF2 198 aa8.44□□□□□ -1.06
CLN8-207ENST00000524258 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
CLN8-207ENST00000524258 IGHV1OR15-1A0A075B7D0 117 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 TRAV1-1A0A0B4J248 108 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 IGLL5B9A064 214 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 SULT1A2P50226 295 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 DAD1P61803 113 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 CCL20P78556 96 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 TDRG1Q3Y452 100 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 IQCF2Q8IXL9 164 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 SFT2D1Q8WV19 159 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 ATG101Q9BSB4 218 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 GSN-AS1Q9NRJ2 163 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 C11orf21Q9P2W6 132 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 KLF12Q9Y4X4 402 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 ARL2-SNX15V9GYD0 113 aa8.43□□□□□ -1.06
CLN8-207ENST00000524258 IGHV4-4A0A075B6R2 117 aa8.42□□□□□ -1.06
CLN8-207ENST00000524258 TRAV34A0A0B4J273 112 aa8.42□□□□□ -1.06
CLN8-207ENST00000524258 CBY3A6NI87 242 aa8.42□□□□□ -1.06
CLN8-207ENST00000524258 TCL1AP56279 114 aa8.42□□□□□ -1.06
CLN8-207ENST00000524258 TCTAP57738 103 aa8.42□□□□□ -1.06
CLN8-207ENST00000524258 FLI1Q01543 452 aaPredicted RBP8.42□□□□□ -1.06
CLN8-207ENST00000524258 IBA57Q5T440 356 aaKnown RBP8.42□□□□□ -1.06
CLN8-207ENST00000524258 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
CLN8-207ENST00000524258 NKX6-2Q9C056 277 aaPredicted RBP8.42□□□□□ -1.06
CLN8-207ENST00000524258 TREM1Q9NP99 234 aa8.42□□□□□ -1.06
CLN8-207ENST00000524258 F6UZH7 168 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 PEX7O00628 323 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 SPINK4O60575 86 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 PAGE4O60829 102 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 H2AFB1P0C5Y9 115 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 ATP5G3P48201 142 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 RAB5CP51148 216 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 Q6ZTI0 123 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 COX8CQ7Z4L0 72 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 ZNF575Q86XF7 245 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 HIST1H2BAQ96A08 127 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 MDFICQ9P1T7 246 aa8.41□□□□□ -1.06
CLN8-207ENST00000524258 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
CLN8-207ENST00000524258 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.06
CLN8-207ENST00000524258 RGS13O14921 159 aa8.4□□□□□ -1.06
CLN8-207ENST00000524258 NKX2-5P52952 324 aaPredicted RBP8.4□□□□□ -1.06
CLN8-207ENST00000524258 ZFP69Q49AA0 526 aa8.4□□□□□ -1.06
CLN8-207ENST00000524258 MUC21Q5SSG8 566 aa8.4□□□□□ -1.06
CLN8-207ENST00000524258 ZNF680Q8NEM1 530 aa8.4□□□□□ -1.06
CLN8-207ENST00000524258 FAM210BQ96KR6 192 aa8.4□□□□□ -1.06
CLN8-207ENST00000524258 BOLA1Q9Y3E2 137 aa8.4□□□□□ -1.06
CLN8-207ENST00000524258 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 A0A1B0GV50 99 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 GNRH2O43555 120 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 IFNA7P01567 189 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 CRIP1P50238 77 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 PRNTQ86SH4 94 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 Q86TA4 180 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 TCEAL7Q9BRU2 100 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
CLN8-207ENST00000524258 MUC4Q99102 2169 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 IGHV3-16A0A0C4DH30 117 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 K7EQM0 130 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 GAGE7O76087 117 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 ATP5G1P05496 136 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
CLN8-207ENST00000524258 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms