RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 IGHV3-7P01780 117 aa1.08□□□□□ -2.24
PCM1-220ENST00000523896 NFYAP23511 347 aaPredicted RBP1.08□□□□□ -2.24
PCM1-220ENST00000523896 FXYD2P54710 66 aa1.08□□□□□ -2.24
PCM1-220ENST00000523896 TCL1AP56279 114 aa1.08□□□□□ -2.24
PCM1-220ENST00000523896 FAM173BQ6P4H8 233 aa1.08□□□□□ -2.24
PCM1-220ENST00000523896 DCXRQ7Z4W1 244 aa1.08□□□□□ -2.24
PCM1-220ENST00000523896 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
PCM1-220ENST00000523896 PRTFDC1Q9NRG1 225 aa1.08□□□□□ -2.24
PCM1-220ENST00000523896 IGKV3D-7A0A0C4DH55 119 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 IGKV3OR2-268A0A0C4DH90 116 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 PAEPP09466 180 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 OR5G3P0C626 314 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 DSCR4P56555 118 aaPredicted RBP1.07□□□□□ -2.24
PCM1-220ENST00000523896 ARF6P62330 175 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 BLCAPP62952 87 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 CCL20P78556 96 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 PMAIP1Q13794 54 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 GUK1Q16774 197 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 COQ5Q5HYK3 327 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 DHFR2Q86XF0 187 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 OTUD6BQ8N6M0 293 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 OR8B3Q8NGG8 313 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 SKA2Q8WVK7 121 aaPredicted RBP1.07□□□□□ -2.24
PCM1-220ENST00000523896 OR4C12Q96R67 309 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 TMEM70Q9BUB7 260 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 EFCAB1Q9HAE3 211 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 MED9Q9NWA0 146 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 IL36BQ9NZH7 164 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 LSM5Q9Y4Y9 91 aaKnown RBP1.07□□□□□ -2.24
PCM1-220ENST00000523896 ARL5AQ9Y689 179 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 LHFPL6Q9Y693 200 aa1.07□□□□□ -2.24
PCM1-220ENST00000523896 TRBV20OR9-2A0A075B6H5 130 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 IRGMA1A4Y4 181 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 GGT3PA6NGU5 568 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 TMEM114B3SHH9 223 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 PRM2P04554 102 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 CALB1P05937 261 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 KRTAP10-4P60372 401 aaPredicted RBP1.06□□□□□ -2.24
PCM1-220ENST00000523896 PRB3Q04118 309 aaPredicted RBP1.06□□□□□ -2.24
PCM1-220ENST00000523896 NDUFA5Q16718 116 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 IBA57Q5T440 356 aaKnown RBP1.06□□□□□ -2.24
PCM1-220ENST00000523896 LPCAT4Q643R3 524 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 VMO1Q7Z5L0 202 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 C1orf158Q8N1D5 194 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 MRPS26Q9BYN8 205 aaKnown RBP1.06□□□□□ -2.24
PCM1-220ENST00000523896 BAIAP2Q9UQB8 552 aa1.06□□□□□ -2.24
PCM1-220ENST00000523896 IGKV2-40A0A087WW87 121 aaPredicted RBP1.05□□□□□ -2.24
PCM1-220ENST00000523896 TRAV10A0A0B4J240 114 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 NBDYA0A0U1RRE5 68 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 FABP5P3A8MUU1 101 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 SDCBPO00560 298 aaPredicted RBP1.05□□□□□ -2.24
PCM1-220ENST00000523896 IGKV2D-40P01614 121 aaPredicted RBP1.05□□□□□ -2.24
PCM1-220ENST00000523896 METTL15P1P0C7V9 234 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 ZNF80P51504 273 aaPredicted RBP1.05□□□□□ -2.24
PCM1-220ENST00000523896 SNRPFP62306 86 aaKnown RBP1.05□□□□□ -2.24
PCM1-220ENST00000523896 PLCXD2Q0VAA5 305 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 STX5Q13190 355 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 KLRD1Q13241 179 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 GRK1Q15835 563 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 HIST3H3Q16695 136 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 DEFB135Q30KP9 77 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 OR2T4Q8NH00 348 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 SLC35B4Q969S0 331 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 C8orf76Q96K31 380 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 PRAP1Q96NZ9 151 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 ADAT1Q9BUB4 502 aaKnown RBP1.05□□□□□ -2.24
PCM1-220ENST00000523896 MED11Q9P086 117 aa1.05□□□□□ -2.24
PCM1-220ENST00000523896 NOSIPQ9Y314 301 aaKnown RBP1.05□□□□□ -2.24
PCM1-220ENST00000523896 M0R2T5 61 aa1.04□□□□□ -2.24
PCM1-220ENST00000523896 KCNK1O00180 336 aa1.04□□□□□ -2.24
PCM1-220ENST00000523896 MRPL33O75394 65 aaKnown RBP1.04□□□□□ -2.24
PCM1-220ENST00000523896 HIST1H1EP10412 219 aaKnown RBP1.04□□□□□ -2.24
PCM1-220ENST00000523896 SDC4P31431 198 aa1.04□□□□□ -2.24
PCM1-220ENST00000523896 GLRXP35754 106 aa1.04□□□□□ -2.24
PCM1-220ENST00000523896 RPL37AP61513 92 aaKnown RBP1.04□□□□□ -2.24
PCM1-220ENST00000523896 SUPT4H1P63272 117 aaKnown RBP1.04□□□□□ -2.24
PCM1-220ENST00000523896 CIRBPQ14011 172 aaKnown RBP1.04□□□□□ -2.24
PCM1-220ENST00000523896 ZNF345Q14585 488 aa1.04□□□□□ -2.24
PCM1-220ENST00000523896 LINC00322Q6ZN03 302 aaPredicted RBP1.04□□□□□ -2.24
PCM1-220ENST00000523896 C11orf40Q8WZ69 217 aa1.04□□□□□ -2.24
PCM1-220ENST00000523896 WDR61Q9GZS3 305 aaKnown RBP1.04□□□□□ -2.24
PCM1-220ENST00000523896 IGKV3-7A0A075B6H7 116 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.03□□□□□ -2.24
PCM1-220ENST00000523896 DEFB4AO15263 64 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 PMP2P02689 132 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 RPS4Y1P22090 263 aaKnown RBP1.03□□□□□ -2.24
PCM1-220ENST00000523896 HIST1H1TP22492 207 aaPredicted RBP1.03□□□□□ -2.24
PCM1-220ENST00000523896 NKX2-5P52952 324 aaPredicted RBP1.03□□□□□ -2.24
PCM1-220ENST00000523896 IFITM2Q01629 132 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 OR2F1Q13607 317 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 CDK5R1Q15078 307 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 CCSMST1Q4G0I0 132 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 CCDC122Q5T0U0 273 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 HIST2H3PS2Q5TEC6 136 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 Q6ZS49 121 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 ZCCHC23Q6ZST2 131 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 ZNF439Q8NDP4 499 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 FAM172AQ8WUF8 416 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 C4orf3Q8WVX3 66 aa1.03□□□□□ -2.24
PCM1-220ENST00000523896 TMEM106AQ96A25 262 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms