RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TMEM14EPQ6UXP3 125 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 NRARPQ7Z6K4 114 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 IQCF2Q8IXL9 164 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 GSKIPQ9P0R6 139 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
SDCBP-211ENST00000523441 NDUFB4O95168 129 aa7.64□□□□□ -1.19
SDCBP-211ENST00000523441 IGLV2-11P01706 119 aa7.64□□□□□ -1.19
SDCBP-211ENST00000523441 CRISP2P16562 243 aa7.64□□□□□ -1.19
SDCBP-211ENST00000523441 FAUP35544 74 aaKnown RBP7.64□□□□□ -1.19
SDCBP-211ENST00000523441 SPCS2Q15005 226 aa7.64□□□□□ -1.19
SDCBP-211ENST00000523441 OR1L4Q8NGR5 311 aa7.64□□□□□ -1.19
SDCBP-211ENST00000523441 GPN1Q9HCN4 374 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-211ENST00000523441 TSC22D2O75157 780 aa7.63□□□□□ -1.19
SDCBP-211ENST00000523441 BCAP31P51572 246 aa7.63□□□□□ -1.19
SDCBP-211ENST00000523441 FAM159AQ6UWV7 190 aa7.63□□□□□ -1.19
SDCBP-211ENST00000523441 DAZ4Q86SG3 579 aaKnown RBP7.63□□□□□ -1.19
SDCBP-211ENST00000523441 MRPL53Q96EL3 112 aaKnown RBP7.63□□□□□ -1.19
SDCBP-211ENST00000523441 DAZAP1Q96EP5 407 aaKnown RBP7.63□□□□□ -1.19
SDCBP-211ENST00000523441 DAZ3Q9NR90 486 aaKnown RBP7.63□□□□□ -1.19
SDCBP-211ENST00000523441 ZNF492Q9P255 531 aa7.63□□□□□ -1.19
SDCBP-211ENST00000523441 RSL24D1Q9UHA3 163 aaKnown RBP7.63□□□□□ -1.19
SDCBP-211ENST00000523441 PRELID1Q9Y255 219 aa7.63□□□□□ -1.19
SDCBP-211ENST00000523441 C5orf51A6NDU8 294 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 FABP12A6NFH5 140 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 FNDC10F2Z333 226 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 GNRH2O43555 120 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 CST7O76096 145 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 ZNF138P52744 262 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 UBE2MP61081 183 aaKnown RBP7.62□□□□□ -1.19
SDCBP-211ENST00000523441 RAB31Q13636 194 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 SH2D6Q7Z4S9 175 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 TOMM5Q8N4H5 51 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 PFDN5Q99471 154 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 SPXQ9BT56 116 aa7.62□□□□□ -1.19
SDCBP-211ENST00000523441 TRGV11A0A075B6L2 103 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 IGKV2D-24A0A075B6R9 120 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 UBE2L5PA0A1B0GUS4 154 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 C9orf170A2RU37 121 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 L7N2F9 121 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 ZNF253O75346 499 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 PFN1P07737 140 aaKnown RBP7.61□□□□□ -1.19
SDCBP-211ENST00000523441 GATA1P15976 413 aaPredicted RBP7.61□□□□□ -1.19
SDCBP-211ENST00000523441 VAMP2P63027 116 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 BAXQ07812 192 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 BAK1Q16611 211 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 IAH1Q2TAA2 248 aaPredicted RBP7.61□□□□□ -1.19
SDCBP-211ENST00000523441 PYDC2Q56P42 97 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 C12orf45Q8N5I9 185 aaPredicted RBP7.61□□□□□ -1.19
SDCBP-211ENST00000523441 SLC25A29Q8N8R3 303 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 RASL10AQ92737 203 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 DNAJC30Q96LL9 226 aa7.61□□□□□ -1.19
SDCBP-211ENST00000523441 FBLL1A6NHQ2 334 aaKnown RBP7.6□□□□□ -1.19
SDCBP-211ENST00000523441 ACOT6Q3I5F7 207 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-211ENST00000523441 GCSAMLQ5JQS6 135 aa7.6□□□□□ -1.19
SDCBP-211ENST00000523441 LELP1Q5T871 98 aa7.6□□□□□ -1.19
SDCBP-211ENST00000523441 PRADC1Q9BSG0 188 aa7.6□□□□□ -1.19
SDCBP-211ENST00000523441 SLC39A9Q9NUM3 307 aa7.6□□□□□ -1.19
SDCBP-211ENST00000523441 RPH3ALQ9UNE2 315 aa7.6□□□□□ -1.19
SDCBP-211ENST00000523441 LSM5Q9Y4Y9 91 aaKnown RBP7.6□□□□□ -1.19
SDCBP-211ENST00000523441 LRP2P98164 4655 aa7.6□□□□□ -1.19
SDCBP-211ENST00000523441 TRAV8-3A0A0A6YYJ7 113 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 C7orf66A4D0T2 115 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 M0R2P5 195 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 NMBP08949 121 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 OR10J4P0C629 311 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 CAV2P51636 162 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 TIRAPP58753 221 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 LAGE3Q14657 143 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 ODF1Q14990 250 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 VWC2Q2TAL6 325 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 ATP6V0E2Q8NHE4 81 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 SLC25A21Q9BQT8 299 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-211ENST00000523441 RABL2AQ9UBK7 228 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-211ENST00000523441 FLVCR2Q9UPI3 526 aa7.59□□□□□ -1.19
SDCBP-211ENST00000523441 GGTLC3B5MD39 225 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 CCSO14618 274 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 FGF7P21781 194 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 AP3S2P59780 193 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 Q8N976 141 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 GGACTQ9BVM4 153 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 SLC25A2Q9BXI2 301 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 GTSF1LQ9H1H1 148 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 UQCC1Q9NVA1 299 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 TMEM14CQ9P0S9 112 aa7.58□□□□□ -1.2
SDCBP-211ENST00000523441 GAGE12JA6NER3 117 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 FAM24AA6NFZ4 105 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 FAM25EA8MYX2 175 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 MBPP02686 304 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-211ENST00000523441 GAGE1Q13065 139 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 GAGE4Q13068 117 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 GAGE5Q13069 117 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 PDE6HQ13956 83 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 ZNF266Q14584 549 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 RHOHQ15669 191 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 TDRG1Q3Y452 100 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 C4orf46Q504U0 113 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 MIR17HGQ75NE6 70 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms