RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 C15orf54Q8N8G6 183 aa7.09□□□□□ -1.27
SHPRH-209ENST00000521977 NUDT10Q8NFP7 164 aa7.09□□□□□ -1.27
SHPRH-209ENST00000521977 NUDT11Q96G61 164 aa7.09□□□□□ -1.27
SHPRH-209ENST00000521977 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
SHPRH-209ENST00000521977 ASCL2Q99929 193 aa7.09□□□□□ -1.27
SHPRH-209ENST00000521977 NDFIP1Q9BT67 221 aa7.09□□□□□ -1.27
SHPRH-209ENST00000521977 SAV1Q9H4B6 383 aaPredicted RBP7.09□□□□□ -1.27
SHPRH-209ENST00000521977 TRRAPQ9Y4A5 3859 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 CT45A10P0DMU9 189 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 CRISP2P16562 243 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 INSL3P51460 131 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 HIST1H1AQ02539 215 aaPredicted RBP7.08□□□□□ -1.28
SHPRH-209ENST00000521977 BEAN1Q3B7T3 259 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 SMUG1Q53HV7 270 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 CT83Q5H943 113 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 GDF5OSQ5U4N7 250 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 PRR27Q6MZM9 219 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 FOXI2Q6ZQN5 318 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 WFDC9Q8NEX5 89 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 SPATA3Q8NHX4 192 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 TMEM158Q8WZ71 300 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 MAP6D1Q9H9H5 199 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 IL36BQ9NZH7 164 aa7.08□□□□□ -1.28
SHPRH-209ENST00000521977 COLCA2A8K830 154 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 GATCO43716 136 aaKnown RBP7.07□□□□□ -1.28
SHPRH-209ENST00000521977 ZNF80P51504 273 aaPredicted RBP7.07□□□□□ -1.28
SHPRH-209ENST00000521977 DEFB131AP59861 70 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 ELOBQ15370 118 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 ODF3L2Q3SX64 289 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 C9orf66Q5T8R8 295 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 ZFAND2AQ8N6M9 145 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 OR4B1Q8NGF8 309 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 FAM110AQ9BQ89 295 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 PYGO2Q9BRQ0 406 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 ANK2Q01484 3957 aa7.07□□□□□ -1.28
SHPRH-209ENST00000521977 TENM1Q9UKZ4 2725 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 ZNF705GA8MUZ8 300 aaPredicted RBP7.06□□□□□ -1.28
SHPRH-209ENST00000521977 SH2D1AO60880 128 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 DUSP14O95147 198 aaKnown RBP7.06□□□□□ -1.28
SHPRH-209ENST00000521977 P01737 135 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 HLA-DRB4P13762 266 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 CMC4P56277 68 aaPredicted RBP7.06□□□□□ -1.28
SHPRH-209ENST00000521977 FAM162BQ5T6X4 162 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 EBLN2Q6P2I7 272 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 C12orf54Q6X4T0 127 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 C3orf56Q8N813 242 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 DAZAP1Q96EP5 407 aaKnown RBP7.06□□□□□ -1.28
SHPRH-209ENST00000521977 CLUHP3Q96NS8 147 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 KRTAP9-9Q9BYP9 154 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
SHPRH-209ENST00000521977 HLA-DRB4X5D2U9 266 aa7.06□□□□□ -1.28
SHPRH-209ENST00000521977 ATRQ13535 2644 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 TRBV24-1A0A075B6N3 115 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 SMIM27A0A1W2PRY6 76 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 FABP5P3A8MUU1 101 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 KLLNB2CW77 178 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 H3BMM0 161 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 CXCL1P09341 107 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 S100PP25815 95 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 PRR9Q5T870 116 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 Q6AWC8 147 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 ZNF575Q86XF7 245 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 MCRIP2Q9BUT9 160 aaKnown RBP7.05□□□□□ -1.28
SHPRH-209ENST00000521977 C19orf73Q9NVV2 129 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 URGCP-MRPS24S4R325 110 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 SORL1Q92673 2214 aa7.05□□□□□ -1.28
SHPRH-209ENST00000521977 TRAV9-1A0A075B6T8 112 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 FAM231BA6NCW3 169 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 KNCNA6PVL3 124 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 CA1P00915 261 aaPredicted RBP7.04□□□□□ -1.28
SHPRH-209ENST00000521977 LEPP41159 167 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 FOXA3P55318 350 aaPredicted RBP7.04□□□□□ -1.28
SHPRH-209ENST00000521977 FAM3BP58499 235 aaPredicted RBP7.04□□□□□ -1.28
SHPRH-209ENST00000521977 ZNF124Q15973 351 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 KCNIP4Q6PIL6 250 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
SHPRH-209ENST00000521977 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 A8MWL6 223 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 OR11H12B2RN74 326 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 TYMSP04818 313 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 C11orf21Q9P2W6 132 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 AGRNO00468 2067 aa7.03□□□□□ -1.28
SHPRH-209ENST00000521977 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
SHPRH-209ENST00000521977 IGKV3D-20A0A0C4DH25 116 aa7.02□□□□□ -1.29
SHPRH-209ENST00000521977 A0A1W2PPQ1 181 aa7.02□□□□□ -1.29
SHPRH-209ENST00000521977 TMEM189A5PLL7 270 aa7.02□□□□□ -1.29
SHPRH-209ENST00000521977 RBMY1BA6NDE4 496 aaKnown RBP7.02□□□□□ -1.29
SHPRH-209ENST00000521977 RBMY1EA6NEQ0 496 aaKnown RBP7.02□□□□□ -1.29
SHPRH-209ENST00000521977 ZNF324O75467 553 aaPredicted RBP7.02□□□□□ -1.29
SHPRH-209ENST00000521977 GPX1P07203 203 aa7.02□□□□□ -1.29
SHPRH-209ENST00000521977 CD7P09564 240 aa7.02□□□□□ -1.29
SHPRH-209ENST00000521977 RBMY1DP0C7P1 496 aaKnown RBP7.02□□□□□ -1.29
SHPRH-209ENST00000521977 RAB5AP20339 215 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms