RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-216	ENST00000521918		M0R3E3	92 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	LY6G6C	O95867	125 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	HBE1	P02100	147 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	SPART-AS1	P0CW21	52 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	CT45A10	P0DMU9	189 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	HIST1H1E	P10412	219 aa	Known RBP	4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	CDKN1B	P46527	198 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	FCN2	Q15485	313 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	RRN3P1	Q2M238	152 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	FAM222A	Q5U5X8	452 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	GFI1B	Q5VTD9	330 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	MIR17HG	Q75NE6	70 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	RPP25L	Q8N5L8	163 aa	Known RBP	4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918		Q8N9P0	234 aa	Predicted RBP	4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	NHLRC2	Q8NBF2	726 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	LRRC20	Q8TCA0	184 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	RNASE8	Q8TDE3	154 aa	Known RBP	4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	FXYD5	Q96DB9	178 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	PHYHIPL	Q96FC7	376 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	FAM19A4	Q96LR4	140 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	MRPL32	Q9BYC8	188 aa	Known RBP	4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	KCNIP2	Q9NS61	270 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	FUT9	Q9Y231	359 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	LRP1B	Q9NZR2	4599 aa		4.18	□□□□□ -1.74
SPIDR-216	ENST00000521918	RYR1	P21817	5038 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	KIAA1109	Q2LD37	5005 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	DEFB131B	A0A096LNP1	70 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	LYRM9	A8MSI8	78 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	IGLL5	B9A064	214 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918		G3V3Q6	166 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	IGKV2-30	P06310	120 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	AZU1	P20160	251 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	EMP1	P54849	157 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	TAS2R60	P59551	318 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	RHOB	P62745	196 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	TMEM256	Q8N2U0	113 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	C20orf144	Q9BQM9	153 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	NIPSNAP3B	Q9BS92	247 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	SMIM3	Q9BZL3	60 aa		4.17	□□□□□ -1.74
SPIDR-216	ENST00000521918	RNF222	A6NCQ9	220 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	KLLN	B2CW77	178 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	C17orf112	F2Z3M2	114 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918		H7BYZ3	331 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	GIP	P09681	153 aa	Predicted RBP	4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	OR10J4	P0C629	311 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	NBEAP1	P0C6P0	100 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	CRISP2	P16562	243 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	ERCC8	Q13216	396 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918		Q5BKY6	102 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	FFAR4	Q5NUL3	377 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	PRR9	Q5T870	116 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	C9orf47	Q6ZRZ4	202 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	EXOC3-AS1	Q8N2X6	119 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	LINC00612	Q8N6U2	182 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	OR10J6P	Q8NGY7	276 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	OR2G3	Q8NGZ4	309 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	TMEM263	Q8WUH6	116 aa	Known RBP	4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	BLNK	Q8WV28	456 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	ASB13	Q8WXK3	278 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	C16orf74	Q96GX8	76 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	URB1-AS1	Q96HZ7	61 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	FAM210B	Q96KR6	192 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	AQP10	Q96PS8	301 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	TMEM208	Q9BTX3	173 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	PAXX	Q9BUH6	204 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	AGPAT4-IT1	Q9H0P7	198 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	OR51M1	Q9H341	326 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	PRELID1	Q9Y255	219 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	TIMM9	Q9Y5J7	89 aa		4.16	□□□□□ -1.74
SPIDR-216	ENST00000521918	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	ZNF324	O75467	553 aa	Predicted RBP	4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	EIF3G	O75821	320 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	IFNA5	P01569	189 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	IGKV2D-40	P01614	121 aa	Predicted RBP	4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	M6PR	P20645	277 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	LEP	P41159	167 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	RAB2A	P61019	212 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	DAD1	P61803	113 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	KHDC3L	Q587J8	217 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	ZNF493	Q6ZR52	646 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	ZFAND2A	Q8N6M9	145 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	LINC01587	Q99440	93 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	VGLL1	Q99990	258 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	LINC00467	Q9BRT7	94 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	NDUFAF3	Q9BU61	184 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	MED28	Q9H204	178 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	NACA	E9PAV3	2078 aa		4.15	□□□□□ -1.75
SPIDR-216	ENST00000521918	TRBV7-9	A0A0J9YWB2	115 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	C7orf71	A4D174	169 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	RBAKDN	A6NC62	111 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	OR7C2	O60412	319 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	SLC25A5	P05141	298 aa	Known RBP	4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	NMB	P08949	121 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	UBE2L3	P68036	154 aa	Known RBP	4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	CD300C	Q08708	224 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	BTN1A1	Q13410	526 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	RGS21	Q2M5E4	152 aa		4.14	□□□□□ -1.75
SPIDR-216	ENST00000521918	FAM122C	Q6P4D5	195 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms