RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 KIR2DL5AQ8N109 375 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 FER1L6-AS1Q8NA97 138 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 UBE2E2Q96LR5 201 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 ODF3Q96PU9 254 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 VGLL1Q99990 258 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 SMPXQ9UHP9 88 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 NAGKQ9UJ70 344 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 LAMTOR2Q9Y2Q5 125 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 U3KQK5 164 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 MED13LQ71F56 2210 aa5.09□□□□□ -1.59
CTNNA1-228ENST00000521640 ZNF462Q96JM2 2506 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 IGHV4-4A0A075B6R2 117 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 IGHV3-35A0A0C4DH35 117 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 A0A1B0GUS0 222 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 PPBPP02775 128 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 LGALS1P09382 135 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 ARMS2P0C7Q2 107 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 MALP21145 153 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 KRTAP10-9P60411 292 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 CTAG1AP78358 180 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 TMEM95Q3KNT9 176 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 KIAA1644Q3SXP7 199 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 UNQ9165/PRO28630Q6UXU0 137 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 Q6ZWC4 215 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 MRPL52Q86TS9 123 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 OR10J6PQ8NGY7 276 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 FAM19A4Q96LR4 140 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 Q96MF0 132 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 RCHY1Q96PM5 261 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 TMEM191AQ9H0A3 160 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 AGPAT4-IT1Q9H0P7 198 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 KLK15Q9H2R5 256 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF702PQ9H963 129 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 LINC00527Q9UJ94 153 aa5.08□□□□□ -1.6
CTNNA1-228ENST00000521640 MYO18BQ8IUG5 2567 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 TRAV2A0A0B4J234 112 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 C20orf202A1L168 122 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 LINC00587B1AMM8 73 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 PRAC2D3DTV9 90 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 J3QKU1 62 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 CRXO43186 299 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 SNAI2O43623 268 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 TRBV12-3P01733 135 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 HLA-DMBP28068 263 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 ID1P41134 155 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF80P51504 273 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 CACNG7P62955 275 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 SCGB2A2Q13296 93 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 PMCHL1Q16048 86 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 GAGE13Q4V321 117 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 LBHQ53QV2 105 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 FAM104BQ5XKR9 115 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 LYZL1Q6UWQ5 148 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 IL17RELQ6ZVW7 336 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 NIT1Q86X76 327 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 DEFB125Q8N687 156 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 Q8TAT8 98 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 FOXC2Q99958 501 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 C20orf144Q9BQM9 153 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 RHPN1-AS1Q9BWJ2 59 aa5.07□□□□□ -1.6
CTNNA1-228ENST00000521640 IGHV3OR16-8A0A075B7F1 116 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 TRAV21A0A0B4J279 112 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF705FA8MVS1 300 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF207O43670 478 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 SCGB1D1O95968 90 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 IGHV3-11P01762 117 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 LINC00614P0C842 121 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 PLA2G2AP14555 144 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 DDTP30046 118 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 Q71RC1 249 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 ORMDL3Q8N138 153 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF664Q8N3J9 261 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 RNF182Q8N6D2 247 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF738Q8NE65 137 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 IL17DQ8TAD2 202 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF747Q9BV97 191 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 SPTAN1Q13813 2472 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 FLNCQ14315 2725 aa5.06□□□□□ -1.6
CTNNA1-228ENST00000521640 ANKRD17O75179 2603 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 IGHV3-66A0A0C4DH42 116 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 TMEM213A2RRL7 107 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 LINC01546A6NGU7 62 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 M0R2Z0 102 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 HOXA3O43365 443 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 ORM1P02763 201 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 BTF3P20290 206 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 DEFA6Q01524 100 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 ERCC8Q13216 396 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 RNASEKQ6P5S7 137 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 ZNF575Q86XF7 245 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 Q8N1X5 172 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 ZFAND2AQ8N6M9 145 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 Q8N976 141 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 OR8A1Q8NGG7 326 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 DCANP1Q8TF63 244 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 URB1-AS1Q96HZ7 61 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 NDUFAF3Q9BU61 184 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 TMEM160Q9NX00 188 aa5.05□□□□□ -1.6
CTNNA1-228ENST00000521640 HSPB8Q9UJY1 196 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms