RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 SP1P08047 785 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 LGALS1P09382 135 aaKnown RBP5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 DEFA4P12838 97 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 MYCNOSP40205 109 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 SEC61BP60468 96 aaKnown RBP5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 UBE2L3P68036 154 aaKnown RBP5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 PAX8Q06710 450 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 C3AR1Q16581 482 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 ORMDL3Q8N138 153 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 NFAM1Q8NET5 270 aaPredicted RBP5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 HIST1H4GQ99525 98 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 PRADC1Q9BSG0 188 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 HIGD1AQ9Y241 93 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 LRRK2Q5S007 2527 aa5.17□□□□□ -1.58
CTNNA1-225ENST00000520865 BSNQ9UPA5 3926 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 SDK2Q58EX2 2172 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 A0A096LNJ9 63 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 K7EM74 188 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 NPFFO15130 113 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 NDUFA7O95182 113 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 ORM1P02763 201 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 B4GALT1P15291 398 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 PLNP26678 52 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 FCER1GP30273 86 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 CCL11P51671 97 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 SUB1P53999 127 aaKnown RBP eCLIP5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 DLX6P56179 175 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 HSPE1P61604 102 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 KLRB1Q12918 225 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 ALKBH6Q3KRA9 238 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 Q75L30 129 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 RPS19BP1Q86WX3 136 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 OR13A1Q8NGR1 328 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 SSMEM1Q8WWF3 244 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 LINC00526Q96FQ7 95 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 PGLYRP4Q96LB8 373 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 PAXXQ9BUH6 204 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 SLC25A39Q9BZJ4 359 aaPredicted RBP5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 NXT2Q9NPJ8 142 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 PRNDQ9UKY0 176 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 FOXA2Q9Y261 457 aaPredicted RBP5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 F11RQ9Y624 299 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 NOTCH2Q04721 2471 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 FLNCQ14315 2725 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 MPDZO75970 2070 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 DOCK11Q5JSL3 2073 aa5.16□□□□□ -1.58
CTNNA1-225ENST00000520865 SPTAN1Q13813 2472 aaKnown RBP5.15□□□□□ -1.58
CTNNA1-225ENST00000520865 RELNP78509 3460 aa5.15□□□□□ -1.58
CTNNA1-225ENST00000520865 IGLV5-52A0A0A0MRZ9 124 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 TMEM30CPA0ZSE6 113 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 C17orf98A8MV24 154 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 INS-IGF2F8WCM5 200 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 J3QT63 122 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 K7ERJ3 54 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 UBE2D1P51668 147 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 EMP1P54849 157 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 ZNF816Q0VGE8 651 aaPredicted RBP5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 C2orf83Q53S99 150 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 TMEM101Q96IK0 257 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 FAM167A-AS1Q96KT0 104 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 TRGV9Q99603 122 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 OR2H1Q9GZK4 316 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 FZR1Q9UM11 496 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 PROCRQ9UNN8 238 aa5.15□□□□□ -1.59
CTNNA1-225ENST00000520865 SPTBP11277 2137 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 TRAV2A0A0B4J234 112 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 TRAV8-2A0A0B4J237 113 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 TRAV8-4A0A0B4J246 113 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 TRAV4A0A0B4J268 109 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 WI2-2373I1.2A0A1W2PRP0 233 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 C15orf61A6NNL5 157 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 CRYGDP07320 174 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 P0DMU3 169 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 FAM231AP0DMU4 169 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 FAM231CP0DMU5 169 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 HLA-DMBP28068 263 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 PSMB2P49721 201 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 FAM104BQ5XKR9 115 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 Q71RC1 249 aaPredicted RBP5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 FAM19A5Q7Z5A7 132 aaPredicted RBP5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 OR1L8Q8NGR8 309 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 TIMD4Q96H15 378 aa5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 MRPL20Q9BYC9 149 aaKnown RBP5.14□□□□□ -1.59
CTNNA1-225ENST00000520865 USP9YO00507 2555 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 IGHV3OR15-7A0A075B7D8 119 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 TRAV12-1A0A0B4J245 112 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 IGHV3-20A0A0C4DH32 117 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 LINC01549A6NIU2 74 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 F5H768 121 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 EFNA2O43921 213 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 LINC00694P0DN24 101 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 IGHV4-30-4P0DP06 118 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 CRYGAP11844 174 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 COL8A2P25067 703 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 HOXD3P31249 432 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 GLRXP35754 106 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 IFI27P40305 119 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 CXCL5P42830 114 aa5.13□□□□□ -1.59
CTNNA1-225ENST00000520865 TMEM170BQ5T4T1 132 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms