RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 OR5AS1Q8N127 324 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 OR5AK2Q8NH90 309 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 C4orf3Q8WVX3 66 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 TMEM191AQ9H0A3 160 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 FKBP11Q9NYL4 201 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 COMMD3Q9UBI1 195 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 MPC1Q9Y5U8 109 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 KIAA1549Q9HCM3 1950 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 SCN3AQ9NY46 2000 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 MED12LQ86YW9 2145 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 PLXNA4Q9HCM2 1894 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 USP54Q70EL1 1684 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 RIMS1Q86UR5 1692 aaKnown RBP1.32□□□□□ -2.2
PTPN12-213ENST00000519553 PTPRGP23470 1445 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 MYOM3Q5VTT5 1437 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 SMG6Q86US8 1419 aaKnown RBP1.32□□□□□ -2.2
PTPN12-213ENST00000519553 TRBV20-1A0A075B6N2 111 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 FAM236AA0A1B0GUQ0 79 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 FAM236BA0A1B0GV22 79 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 FAM92AA1XBS5 289 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 YPEL1O60688 119 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 CD3DP04234 171 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 CD14P08571 375 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 CXCL8P10145 99 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 RNASE3P12724 160 aaKnown RBP1.32□□□□□ -2.2
PTPN12-213ENST00000519553 BRS3P32247 399 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 ETV6P41212 452 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 PLGLB1Q02325 96 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 CCSMST1Q4G0I0 132 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 FAM19A2Q8N3H0 131 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 SDF2Q99470 211 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 GGACTQ9BVM4 153 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 CST11Q9H112 138 aa1.32□□□□□ -2.2
PTPN12-213ENST00000519553 ROCK2O75116 1388 aaKnown RBP1.32□□□□□ -2.2
PTPN12-213ENST00000519553 UHRF1BP1LA0JNW5 1464 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 ADGRB1O14514 1584 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 MYH1P12882 1939 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 TRAV14DV4A0A0A6YYC5 116 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 C5orf67F2Z3F1 127 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 GNG7O60262 68 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 IGF2P01344 180 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 S100A1P23297 94 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 C10orf55Q5SWW7 151 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 IZUMO2Q6UXV1 221 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 FOXI2Q6ZQN5 318 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 ATOH7Q8N100 152 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 C10orf111Q8N326 155 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 OR10AG1Q8NH19 301 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 OTOSQ8NHW6 89 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 Q8TAT8 98 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 TMEM203Q969S6 136 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 MED9Q9NWA0 146 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 LSM2Q9Y333 95 aaKnown RBP1.31□□□□□ -2.2
PTPN12-213ENST00000519553 NALCNQ8IZF0 1738 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 IBTKQ9P2D0 1353 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-213ENST00000519553 ERBINQ96RT1 1412 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 ZNF518AQ6AHZ1 1483 aa1.31□□□□□ -2.2
PTPN12-213ENST00000519553 MYOFQ9NZM1 2061 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 ALPK2Q86TB3 2170 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 PHLPP1O60346 1717 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 C9orf170A2RU37 121 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 IFITM5A6NNB3 132 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 M0R2P5 195 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 CDC42EP2O14613 210 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 IFNGP01579 166 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 RBP4P02753 201 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 CKS2P33552 79 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 PCBD1P61457 104 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 WHAMMP3Q1A5X7 153 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 SCIMPQ6UWF3 145 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 CLECL1Q8IZS7 167 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 ZNF431Q8TF32 576 aaPredicted RBP1.3□□□□□ -2.2
PTPN12-213ENST00000519553 PATE1Q8WXA2 126 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 CIB3Q96Q77 187 aaPredicted RBP1.3□□□□□ -2.2
PTPN12-213ENST00000519553 SAR1AQ9NR31 198 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 CCDC167Q9P0B6 97 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 FOCADQ5VW36 1801 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 DLG5Q8TDM6 1919 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 FAM135AQ9P2D6 1515 aa1.3□□□□□ -2.2
PTPN12-213ENST00000519553 LAMB4A4D0S4 1761 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 SPEF2Q9C093 1822 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 MGAMO43451 1857 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 MYH6P13533 1939 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 ZNF736B4DX44 427 aaPredicted RBP1.29□□□□□ -2.2
PTPN12-213ENST00000519553 HYPMO75409 117 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 IGHV3-33P01772 117 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 APODP05090 189 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 BTG2P78543 158 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 MIR22HGQ0VDD5 57 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 NEDD8Q15843 81 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 CLLU1Q5K131 121 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 ATP11AUNQ6ZP68 121 aa1.29□□□□□ -2.2
PTPN12-213ENST00000519553 INTS1Q8N201 2190 aaKnown RBP1.29□□□□□ -2.2
PTPN12-213ENST00000519553 EIF4G3O43432 1585 aaKnown RBP1.29□□□□□ -2.2
PTPN12-213ENST00000519553 MYH13Q9UKX3 1938 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 TRBV6-8A0A0A6YYG3 113 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 IGHV1-24A0A0C4DH33 117 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 C3orf85A0A1B0GTC6 90 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 CCL16O15467 120 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms