RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 DKK2Q9UBU2 259 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 HLA-DRB4X5D2U9 266 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 FAM3BP58499 235 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-213ENST00000519113 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
CTNNA1-213ENST00000519113 SMIM7Q9BQ49 75 aa13.48□□□□□ -0.25
CTNNA1-213ENST00000519113 IGHV3OR16-12A0A075B7B8 117 aa13.47□□□□□ -0.25
CTNNA1-213ENST00000519113 HTN3P15516 51 aa13.47□□□□□ -0.25
CTNNA1-213ENST00000519113 SUMO1P63165 101 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-213ENST00000519113 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
CTNNA1-213ENST00000519113 PARLQ9H300 379 aa13.47□□□□□ -0.25
CTNNA1-213ENST00000519113 SCO2A0A1W2PP80 73 aa13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 NDUFB4O95168 129 aa13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 RPL7P18124 248 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 RANP62826 216 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 TMEM241Q24JQ0 296 aa13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 C11orf52Q96A22 123 aa13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 TCEAL7Q9BRU2 100 aa13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 NAT8Q9UHE5 227 aa13.46□□□□□ -0.25
CTNNA1-213ENST00000519113 GGTLC3B5MD39 225 aa13.45□□□□□ -0.26
CTNNA1-213ENST00000519113 PNRC1Q12796 327 aaPredicted RBP13.45□□□□□ -0.26
CTNNA1-213ENST00000519113 SIGLEC15Q6ZMC9 328 aa13.45□□□□□ -0.26
CTNNA1-213ENST00000519113 OR8I2Q8N0Y5 310 aa13.45□□□□□ -0.26
CTNNA1-213ENST00000519113 ZNF586Q9NXT0 402 aa13.45□□□□□ -0.26
CTNNA1-213ENST00000519113 LRP1BQ9NZR2 4599 aa13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 SNRPCP09234 159 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 TNP2Q05952 138 aa13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 RHEBQ15382 184 aa13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 TMEM88Q6PEY1 159 aa13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 SDF2L1Q9HCN8 221 aa13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 RPS10P5Q9NQ39 176 aa13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 OTORQ9NRC9 128 aa13.44□□□□□ -0.26
CTNNA1-213ENST00000519113 TRBV19A0A075B6N1 114 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 C7orf77A4D0Y5 90 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 PGPA6NDG6 321 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 MRPS12O15235 138 aaKnown RBP13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 BUB3O43684 328 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 IGKV3-20P01619 116 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 IGLC2P0DOY2 106 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 FXYD7P58549 80 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 BTN1A1Q13410 526 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 C1orf194Q5T5A4 169 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 C15orf53Q8NAA6 179 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 GPR82Q96P67 336 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 GOLT1BQ9Y3E0 138 aa13.43□□□□□ -0.26
CTNNA1-213ENST00000519113 B4DEV8 164 aa13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 H3BTX0 84 aa13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 SLC25A5P05141 298 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 Q8N1X5 172 aa13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 LYPD1Q8N2G4 141 aa13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 CLUHP3Q96NS8 147 aa13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 ATG101Q9BSB4 218 aa13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 Q9H3A6 140 aa13.42□□□□□ -0.26
CTNNA1-213ENST00000519113 ID1P41134 155 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 AKR1C3P42330 323 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 GALR1P47211 349 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 DAD1P61803 113 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 GDF5OSQ5U4N7 250 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 FOXI2Q6ZQN5 318 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 HIST1H2BAQ96A08 127 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 SAV1Q9H4B6 383 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 EPDR1Q9UM22 224 aa13.41□□□□□ -0.26
CTNNA1-213ENST00000519113 PEX7O00628 323 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 PSG9Q00887 426 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 PDE6HQ13956 83 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 ADIRFQ15847 76 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 C6orf223Q8N319 242 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 C5orf17Q8NAS9 161 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 OR4B1Q8NGF8 309 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 CMTM2Q8TAZ6 248 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
CTNNA1-213ENST00000519113 NBDYA0A0U1RRE5 68 aa13.39□□□□□ -0.27
CTNNA1-213ENST00000519113 RPL35P42766 123 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-213ENST00000519113 CNN1P51911 297 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-213ENST00000519113 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-213ENST00000519113 RRN3P1Q2M238 152 aa13.39□□□□□ -0.27
CTNNA1-213ENST00000519113 SMCO4Q9NRQ5 59 aa13.39□□□□□ -0.27
CTNNA1-213ENST00000519113 C9JCJ5 164 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 TAS2R60P59551 318 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 C17orf77Q96MU5 243 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 SCRT2Q9NQ03 307 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 PRELID1Q9Y255 219 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 LY96Q9Y6Y9 160 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 NACAE9PAV3 2078 aa13.38□□□□□ -0.27
CTNNA1-213ENST00000519113 A0A087WWC5 75 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 A0A087X0K7 114 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 ZNF253O75346 499 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 GNG4P50150 75 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 MEOX2P50222 304 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 DEFB1P60022 68 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 GNG5P63218 68 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 EXOC3-AS1Q8N2X6 119 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 RPH3ALQ9UNE2 315 aa13.37□□□□□ -0.27
CTNNA1-213ENST00000519113 MT-ND4LP03901 98 aa13.36□□□□□ -0.27
CTNNA1-213ENST00000519113 EBLN2Q6P2I7 272 aa13.36□□□□□ -0.27
CTNNA1-213ENST00000519113 LINC01551Q86U37 167 aa13.36□□□□□ -0.27
CTNNA1-213ENST00000519113 CBLN2Q8IUK8 224 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms