RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 LY6DQ14210 128 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 LINC01600Q96MT4 127 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 PRO1854Q9UHT4 67 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 EPOPA6NHQ4 379 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 PLXNB1O43157 2135 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 PLGLAQ15195 96 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 MRPL23Q16540 153 aaKnown RBP10.49□□□□□ -0.73
PABPC1-208ENST00000519004 TIMM23O14925 209 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 IGKV3-15P01624 115 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 PRUNE2Q8WUY3 3088 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 WIPF1O43516 503 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 IGKV1-17P01599 117 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 TRGV3P03979 118 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 CCL4P13236 92 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 WT1P19544 449 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-208ENST00000519004 SRSF2Q01130 221 aaKnown RBP10.48□□□□□ -0.73
PABPC1-208ENST00000519004 TMEM30BQ3MIR4 351 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 Q6ZS46 218 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 Q8TAT8 98 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 FAM186AA6NE01 2351 aa10.48□□□□□ -0.73
PABPC1-208ENST00000519004 TRAV26-2A0A0B4J265 109 aa10.47□□□□□ -0.73
PABPC1-208ENST00000519004 LGALS9O00182 355 aa10.47□□□□□ -0.73
PABPC1-208ENST00000519004 IGFBP4P22692 258 aa10.47□□□□□ -0.73
PABPC1-208ENST00000519004 GLRXP35754 106 aa10.47□□□□□ -0.73
PABPC1-208ENST00000519004 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
PABPC1-208ENST00000519004 CECR9P0C854 216 aa10.47□□□□□ -0.73
PABPC1-208ENST00000519004 RPL7P18124 248 aaKnown RBP10.47□□□□□ -0.73
PABPC1-208ENST00000519004 MSMPQ1L6U9 139 aa10.47□□□□□ -0.73
PABPC1-208ENST00000519004 GAFA1Q96PS6 74 aa10.47□□□□□ -0.73
PABPC1-208ENST00000519004 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.73
PABPC1-208ENST00000519004 M0R2P5 195 aa10.46□□□□□ -0.73
PABPC1-208ENST00000519004 ORM1P02763 201 aa10.46□□□□□ -0.73
PABPC1-208ENST00000519004 VMA21Q3ZAQ7 101 aa10.46□□□□□ -0.73
PABPC1-208ENST00000519004 TIMD4Q96H15 378 aa10.46□□□□□ -0.73
PABPC1-208ENST00000519004 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.73
PABPC1-208ENST00000519004 TRBV7-7A0A0K0K1E9 115 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 K7ESF4 209 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 TM4SF5O14894 197 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 ELANEP08246 267 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 C3orf36Q3SXR2 165 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 LINC01620Q4KN68 170 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 IL17RELQ6ZVW7 336 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 FAM216BQ8N7L0 139 aa10.46□□□□□ -0.74
PABPC1-208ENST00000519004 P0DMU3 169 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 FAM231AP0DMU4 169 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 FAM231CP0DMU5 169 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 RPL27AP46776 148 aaKnown RBP10.45□□□□□ -0.74
PABPC1-208ENST00000519004 KLK15Q9H2R5 256 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 SIGLEC9Q9Y336 463 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 CELSR3Q9NYQ7 3312 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 RAI1Q7Z5J4 1906 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-208ENST00000519004 H3BMM0 161 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 PDE6HQ13956 83 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 UBE2WQ96B02 151 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 TOMM6Q96B49 74 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 CCL13Q99616 98 aa10.45□□□□□ -0.74
PABPC1-208ENST00000519004 OOSP1A8MZH6 123 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 I3L2K1 104 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 ERCC8Q13216 396 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-208ENST00000519004 NPFFO15130 113 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 NDUFA7O95182 113 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 CFIP05156 583 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-208ENST00000519004 LRRC75A-AS1Q8N1F1 130 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 ZNF491Q8N8L2 437 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 DEFB108BQ8NET1 73 aa10.44□□□□□ -0.74
PABPC1-208ENST00000519004 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
PABPC1-208ENST00000519004 ZNF56Q15929 161 aa10.43□□□□□ -0.74
PABPC1-208ENST00000519004 SLC25A29Q8N8R3 303 aa10.43□□□□□ -0.74
PABPC1-208ENST00000519004 EBI3Q14213 229 aa10.43□□□□□ -0.74
PABPC1-208ENST00000519004 ATXN8Q156A1 80 aa10.43□□□□□ -0.74
PABPC1-208ENST00000519004 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
PABPC1-208ENST00000519004 SMIM2Q9BVW6 85 aa10.43□□□□□ -0.74
PABPC1-208ENST00000519004 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 POM121L12Q8N7R1 296 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 RNF125Q96EQ8 232 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 EYSQ5T1H1 3165 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 TEX22C9J3V5 150 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 J3KT08 172 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 TSPEAR-AS2P59090 65 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 HERVK_113P63121 156 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 HES1Q14469 280 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 C3orf22Q8N5N4 141 aa10.42□□□□□ -0.74
PABPC1-208ENST00000519004 FAM236AA0A1B0GUQ0 79 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 FAM236BA0A1B0GV22 79 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 CCL3L1P16619 93 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 TCF15Q12870 199 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 A0A1B0GX51 115 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 A4D1N5 150 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 SPRY3O43610 288 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 IGHV4-39P01824 125 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 ORMDL2Q53FV1 153 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 Q6ZT83 130 aa10.41□□□□□ -0.74
PABPC1-208ENST00000519004 KLK5Q9Y337 293 aaPredicted RBP10.41□□□□□ -0.74
PABPC1-208ENST00000519004 ABCA1O95477 2261 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms