RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 HOXA5P20719 270 aa12.95□□□□□ -0.34
HOXA3-203ENST00000518451 RAB2AP61019 212 aa12.95□□□□□ -0.34
HOXA3-203ENST00000518451 OR2G3Q8NGZ4 309 aa12.95□□□□□ -0.34
HOXA3-203ENST00000518451 PSMG3Q9BT73 122 aaPredicted RBP12.95□□□□□ -0.34
HOXA3-203ENST00000518451 TMPRSS5Q9H3S3 457 aa12.95□□□□□ -0.34
HOXA3-203ENST00000518451 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
HOXA3-203ENST00000518451 A0A0J9YY99 117 aa12.94□□□□□ -0.34
HOXA3-203ENST00000518451 PRR9Q5T870 116 aa12.94□□□□□ -0.34
HOXA3-203ENST00000518451 SSX7Q7RTT5 188 aa12.94□□□□□ -0.34
HOXA3-203ENST00000518451 HSD17B11Q8NBQ5 300 aa12.94□□□□□ -0.34
HOXA3-203ENST00000518451 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
HOXA3-203ENST00000518451 LINC00588Q9Y4M8 146 aa12.94□□□□□ -0.34
HOXA3-203ENST00000518451 CDC34P49427 236 aaPredicted RBP12.93□□□□□ -0.34
HOXA3-203ENST00000518451 ZNF415Q09FC8 603 aa12.93□□□□□ -0.34
HOXA3-203ENST00000518451 FAM159AQ6UWV7 190 aa12.93□□□□□ -0.34
HOXA3-203ENST00000518451 NBDYA0A0U1RRE5 68 aa12.92□□□□□ -0.34
HOXA3-203ENST00000518451 SLAQ13239 276 aa12.92□□□□□ -0.34
HOXA3-203ENST00000518451 Q6AWC8 147 aa12.92□□□□□ -0.34
HOXA3-203ENST00000518451 TP53TG3Q9ULZ0 132 aa12.92□□□□□ -0.34
HOXA3-203ENST00000518451 BORCS7-ASMTA0A0B4J1R7 106 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 SERTM2A0A1B0GWG4 89 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 HMGB3O15347 200 aaKnown RBP12.91□□□□□ -0.34
HOXA3-203ENST00000518451 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
HOXA3-203ENST00000518451 STAG3L2P0CL84 134 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 STAG3L3P0CL85 134 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 ATP6V0CP27449 155 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 GOLT1AQ6ZVE7 132 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 ST6GAL2Q96JF0 529 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 SPXQ9BT56 116 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 Q9H8V8 135 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 RPH3ALQ9UNE2 315 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 TNFSF18Q9UNG2 199 aa12.91□□□□□ -0.34
HOXA3-203ENST00000518451 TRGV11A0A075B6L2 103 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 A0A1B0GVY2 172 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 K7EQM0 130 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 RGS21Q2M5E4 152 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 MUC21Q5SSG8 566 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 Q6ZQT7 251 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 RAB24Q969Q5 203 aa12.9□□□□□ -0.34
HOXA3-203ENST00000518451 ACTR3CQ9C0K3 210 aaPredicted RBP12.9□□□□□ -0.34
HOXA3-203ENST00000518451 Q5BKY6 102 aa12.89□□□□□ -0.35
HOXA3-203ENST00000518451 TMEM167BQ9NRX6 74 aa12.89□□□□□ -0.35
HOXA3-203ENST00000518451 MRPL16Q9NX20 251 aaKnown RBP12.89□□□□□ -0.35
HOXA3-203ENST00000518451 FXYD6-FXYD2A0A087WZ82 144 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 PAX4O43316 350 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 CXorf1O96002 111 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 ESRGQ1W209 222 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 TDRG1Q3Y452 100 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 TTC32Q5I0X7 151 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 OR2T35Q8NGX2 323 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 NDFIP1Q9BT67 221 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
HOXA3-203ENST00000518451 GCHFRP30047 84 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 TMEM183BQ1AE95 376 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 TMEM183AQ8IXX5 376 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 C6orf223Q8N319 242 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 C5orf17Q8NAS9 161 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 KCNS1Q96KK3 526 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 UPK3BQ9BT76 320 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
HOXA3-203ENST00000518451 NACAE9PAV3 2078 aa12.86□□□□□ -0.35
HOXA3-203ENST00000518451 A0A096LPF7 62 aa12.86□□□□□ -0.35
HOXA3-203ENST00000518451 RASL10AQ92737 203 aa12.86□□□□□ -0.35
HOXA3-203ENST00000518451 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
HOXA3-203ENST00000518451 MRPS16Q9Y3D3 137 aaKnown RBP12.86□□□□□ -0.35
HOXA3-203ENST00000518451 ICOSQ9Y6W8 199 aa12.86□□□□□ -0.35
HOXA3-203ENST00000518451 HECTD4Q9Y4D8 3996 aa12.86□□□□□ -0.35
HOXA3-203ENST00000518451 RNF222A6NCQ9 220 aa12.85□□□□□ -0.35
HOXA3-203ENST00000518451 FBLL1A6NHQ2 334 aaKnown RBP12.85□□□□□ -0.35
HOXA3-203ENST00000518451 TAAR5O14804 337 aa12.85□□□□□ -0.35
HOXA3-203ENST00000518451 IGHV3-53P01767 116 aa12.85□□□□□ -0.35
HOXA3-203ENST00000518451 SUMO1P63165 101 aaKnown RBP12.85□□□□□ -0.35
HOXA3-203ENST00000518451 RPL7L1Q6DKI1 246 aaKnown RBP12.85□□□□□ -0.35
HOXA3-203ENST00000518451 SH3BGRL3Q9H299 93 aa12.85□□□□□ -0.35
HOXA3-203ENST00000518451 TRAV8-1A0A0A6YYK1 113 aa12.84□□□□□ -0.35
HOXA3-203ENST00000518451 TRGV4A0A0C4DH28 118 aa12.84□□□□□ -0.35
HOXA3-203ENST00000518451 A0A1W2PPQ1 181 aa12.84□□□□□ -0.35
HOXA3-203ENST00000518451 TCRAP04437 139 aa12.84□□□□□ -0.35
HOXA3-203ENST00000518451 GNG5P63218 68 aa12.84□□□□□ -0.35
HOXA3-203ENST00000518451 IQCF2Q8IXL9 164 aa12.84□□□□□ -0.35
HOXA3-203ENST00000518451 SDF2L1Q9HCN8 221 aa12.84□□□□□ -0.35
HOXA3-203ENST00000518451 CRYBA4P53673 196 aa12.83□□□□□ -0.36
HOXA3-203ENST00000518451 FHL2Q14192 279 aa12.83□□□□□ -0.36
HOXA3-203ENST00000518451 MRPL23Q16540 153 aaKnown RBP12.83□□□□□ -0.36
HOXA3-203ENST00000518451 EPDR1Q9UM22 224 aa12.83□□□□□ -0.36
HOXA3-203ENST00000518451 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
HOXA3-203ENST00000518451 M0R2P5 195 aa12.82□□□□□ -0.36
HOXA3-203ENST00000518451 GNRH2O43555 120 aa12.82□□□□□ -0.36
HOXA3-203ENST00000518451 BTF3P20290 206 aaKnown RBP12.82□□□□□ -0.36
HOXA3-203ENST00000518451 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
HOXA3-203ENST00000518451 C8orf49Q96NF6 230 aa12.82□□□□□ -0.36
HOXA3-203ENST00000518451 DNAH2Q9P225 4427 aa12.81□□□□□ -0.36
HOXA3-203ENST00000518451 CTXND1A0A1B0GTU2 59 aa12.81□□□□□ -0.36
HOXA3-203ENST00000518451 F6UZH7 168 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms