RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 F5H5K5 113 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 F8VRH5 84 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 LIN7AO14910 233 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 PITX3O75364 302 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 LYPLA2O95372 231 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 NEFHP12036 1026 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FGF7P21781 194 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 NPC2P61916 151 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 RPS28P62857 69 aaKnown RBP-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 LCN2P80188 198 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CCSMST1Q4G0I0 132 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 EXOC8Q8IYI6 725 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 DTNBP1Q96EV8 351 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 BPIFA3Q9BQP9 254 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 LXNQ9BS40 222 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 EFCAB11Q9BUY7 163 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SPANXB1Q9NS25 103 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FBXL12Q9NXK8 326 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 EXTL2Q9UBQ6 330 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 AP1M2Q9Y6Q5 423 aa-2.24□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CRYBG3Q68DQ2 2970 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 AQRO60306 1485 aaKnown RBP eCLIP-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TCRBV3S1A0A5B6 114 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CRYZL1O95825 349 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SERPINE1P05121 402 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 HLA-EP13747 358 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 IDO1P14902 403 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SRP14P37108 136 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 DNAJB13P59910 316 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 RANP62826 216 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 HIST3H3Q16695 136 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 EIF5AL1Q6IS14 154 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CENPQQ7L2Z9 268 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 OR8J3Q8NGG0 315 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 OR8J2Q8NGG1 315 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 OR5AK3PQ8NH89 298 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SPRR4Q96PI1 79 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TMEM237Q96Q45 408 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CIB1Q99828 191 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 C11orf68Q9H3H3 251 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FAM96AQ9H5X1 160 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 HYPKQ9NX55 129 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 MOSPD1Q9UJG1 213 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 RABL2BQ9UNT1 228 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 V9GYY9 64 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 NEURL4Q96JN8 1562 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 NINLQ9Y2I6 1382 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 NRXN2Q9P2S2 1712 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 MYOM3Q5VTT5 1437 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 PPIP5K1Q6PFW1 1433 aa-2.25□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CFAP54Q96N23 3096 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 ARFGEF1Q9Y6D6 1849 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TULP4Q9NRJ4 1543 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TRBV7-4A0A0J9YYF1 115 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 C3orf85A0A1B0GTC6 90 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 C1orf196B1AJZ1 125 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 GMFGO60234 142 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 AP3S2P59780 193 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 UBE2HP62256 183 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 ARF6P62330 175 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 UBE2BP63146 152 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 POU6F1Q14863 301 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 OR8B8Q15620 311 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 OR2T2Q6IF00 324 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 C3orf33Q6P1S2 294 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TMEM91Q6ZNR0 172 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 BAGE3Q86Y29 109 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 WFDC13Q8IUB5 93 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 C20orf197Q8N268 126 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 WFDC9Q8NEX5 89 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CCDC148Q8NFR7 591 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FAM172AQ8WUF8 416 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 DNAJB3Q8WWF6 145 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SIGMAR1Q99720 223 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 PBDC1Q9BVG4 233 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TIPINQ9BVW5 301 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 LYRM4Q9HD34 91 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 VPS29Q9UBQ0 182 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CDC42BPAQ5VT25 1732 aa-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 POLA1P09884 1462 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-1238P-201ENST00000517215 IFT172Q9UG01 1749 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 EXOC1LA0A1B0GW35 172 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 H7BZZ5 65 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 MTX2O75431 263 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SERPINA1P01009 418 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 RBP1P09455 135 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SLC35E2BP0CK96 405 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 PIPP12273 146 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FABP4P15090 132 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 RANBP1P43487 201 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 EDDM3BP56851 147 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 RAB5BP61020 215 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SMAGPQ0VAQ4 97 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 Q6JHZ5 121 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CYP2G1PQ6ZSU1 146 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 MRPL52Q86TS9 123 aaKnown RBP-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SYCE1Q8N0S2 351 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 OR6N2Q8NGY6 317 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 STOML3Q8TAV4 291 aa-2.27□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms