RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 TCOF1Q13428 1488 aaKnown RBP0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 TRBV27A0A0K0K1C4 114 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 A0A1W2PRE2 83 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 PRORSD1PA6NEY8 169 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 ARL5CA6NH57 179 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 SAA1P0DJI8 122 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 HRCT1Q6UXD1 115 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 C3orf62Q6ZUJ4 267 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 CCDC32Q9BV29 185 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 PCBD2Q9H0N5 130 aa0.19□□□□□ -2.38
RNU6-1028P-201ENST00000517164 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
RNU6-1028P-201ENST00000517164 EVI2AP22794 236 aa0.18□□□□□ -2.38
RNU6-1028P-201ENST00000517164 FXYD3Q14802 87 aa0.18□□□□□ -2.38
RNU6-1028P-201ENST00000517164 ZNF56Q15929 161 aa0.18□□□□□ -2.38
RNU6-1028P-201ENST00000517164 SPINK13Q1W4C9 94 aa0.18□□□□□ -2.38
RNU6-1028P-201ENST00000517164 SPINK6Q6UWN8 80 aa0.18□□□□□ -2.38
RNU6-1028P-201ENST00000517164 MPC1Q9Y5U8 109 aa0.18□□□□□ -2.38
RNU6-1028P-201ENST00000517164 TRAV13-1A0A0B4J241 112 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 NBDYA0A0U1RRE5 68 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 LOC101927531A0A1B0GV80 90 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 DNAJB13P59910 316 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 ASB16-AS1Q495Z4 193 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 MORN4Q8NDC4 146 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 LXNQ9BS40 222 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 COMMD3Q9UBI1 195 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 MED31Q9Y3C7 131 aa0.17□□□□□ -2.38
RNU6-1028P-201ENST00000517164 FAM135BQ49AJ0 1406 aa0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 LOC107986453A0A1B0GWG9 222 aa0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 H3BMG7 143 aa0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 SLC25A4P12235 298 aa0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 RPL37P61927 97 aaKnown RBP0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 MRPL35Q9NZE8 188 aaKnown RBP0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 MRPL36Q9P0J6 103 aaKnown RBP0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 ZCCHC11Q5TAX3 1644 aaKnown RBP0.16□□□□□ -2.38
RNU6-1028P-201ENST00000517164 PFDN1O60925 122 aa0.15□□□□□ -2.39
RNU6-1028P-201ENST00000517164 CRYGSP22914 178 aa0.15□□□□□ -2.39
RNU6-1028P-201ENST00000517164 DEFB132Q7Z7B7 95 aa0.15□□□□□ -2.39
RNU6-1028P-201ENST00000517164 C5orf56Q8N8D9 126 aa0.15□□□□□ -2.39
RNU6-1028P-201ENST00000517164 THEM6Q8WUY1 208 aa0.15□□□□□ -2.39
RNU6-1028P-201ENST00000517164 ATPIF1Q9UII2 106 aa0.15□□□□□ -2.39
RNU6-1028P-201ENST00000517164 FER1L6Q2WGJ9 1857 aa0.15□□□□□ -2.39
RNU6-1028P-201ENST00000517164 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.14□□□□□ -2.39
RNU6-1028P-201ENST00000517164 TRBV7-6A0A0J9YX20 115 aa0.14□□□□□ -2.39
RNU6-1028P-201ENST00000517164 CCSMST1Q4G0I0 132 aa0.14□□□□□ -2.39
RNU6-1028P-201ENST00000517164 OR51A4Q8NGJ6 313 aa0.14□□□□□ -2.39
RNU6-1028P-201ENST00000517164 TRAPPC2LQ9UL33 140 aa0.14□□□□□ -2.39
RNU6-1028P-201ENST00000517164 AFDNP55196 1824 aaKnown RBP0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 TMEM30CPA0ZSE6 113 aa0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 E7EQ34 232 aa0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 CDC42EP2O14613 210 aa0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 EDF1O60869 148 aaKnown RBP0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 IGF2P01344 180 aa0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 POLR2HP52434 150 aaKnown RBP0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 GTF2A1P52655 376 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 BLCAPP62952 87 aa0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 C19orf12Q9NSK7 152 aa0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 CBLN4Q9NTU7 201 aa0.13□□□□□ -2.39
RNU6-1028P-201ENST00000517164 LOC107984640A0A0U1RRK4 108 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 TMEM189A5PLL7 270 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 HIGD1CA8MV81 97 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 FAM107AO95990 144 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 IGKCP01834 107 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 RPL7P18124 248 aaKnown RBP0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 SRP9P49458 86 aaKnown RBP0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 LYPD5Q6UWN5 251 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 OR8J3Q8NGG0 315 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 MYH1P12882 1939 aa0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 TPRP12270 2363 aaKnown RBP0.12□□□□□ -2.39
RNU6-1028P-201ENST00000517164 IFITM5A6NNB3 132 aa0.11□□□□□ -2.39
RNU6-1028P-201ENST00000517164 M0QZK8 103 aa0.11□□□□□ -2.39
RNU6-1028P-201ENST00000517164 FXYD1O00168 92 aa0.11□□□□□ -2.39
RNU6-1028P-201ENST00000517164 SMIM7Q9BQ49 75 aa0.11□□□□□ -2.39
RNU6-1028P-201ENST00000517164 ESPL1Q14674 2120 aa0.11□□□□□ -2.39
RNU6-1028P-201ENST00000517164 RBBP6Q7Z6E9 1792 aaKnown RBP0.11□□□□□ -2.39
RNU6-1028P-201ENST00000517164 TPST1O60507 370 aa0.1□□□□□ -2.39
RNU6-1028P-201ENST00000517164 IL7P13232 177 aa0.1□□□□□ -2.39
RNU6-1028P-201ENST00000517164 ETV6P41212 452 aa0.1□□□□□ -2.39
RNU6-1028P-201ENST00000517164 RHOHQ15669 191 aa0.1□□□□□ -2.39
RNU6-1028P-201ENST00000517164 BRK1Q8WUW1 75 aa0.1□□□□□ -2.39
RNU6-1028P-201ENST00000517164 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.39
RNU6-1028P-201ENST00000517164 NAT14Q8WUY8 206 aa0.09□□□□□ -2.4
RNU6-1028P-201ENST00000517164 A2MP01023 1474 aa0.09□□□□□ -2.4
RNU6-1028P-201ENST00000517164 A0A0G2JMM0 328 aa0.08□□□□□ -2.4
RNU6-1028P-201ENST00000517164 HBDP02042 147 aa0.08□□□□□ -2.4
RNU6-1028P-201ENST00000517164 FABP1P07148 127 aa0.08□□□□□ -2.4
RNU6-1028P-201ENST00000517164 IQCJQ1A5X6 159 aa0.08□□□□□ -2.4
RNU6-1028P-201ENST00000517164 SMPXQ9UHP9 88 aa0.08□□□□□ -2.4
RNU6-1028P-201ENST00000517164 ABCA1O95477 2261 aa0.07□□□□□ -2.4
RNU6-1028P-201ENST00000517164 PTPRZ1P23471 2315 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1028P-201ENST00000517164 CD3DP04234 171 aa0.07□□□□□ -2.4
RNU6-1028P-201ENST00000517164 LSM3P62310 102 aaKnown RBP0.07□□□□□ -2.4
RNU6-1028P-201ENST00000517164 IDO2Q6ZQW0 420 aa0.07□□□□□ -2.4
RNU6-1028P-201ENST00000517164 OTOSQ8NHW6 89 aa0.07□□□□□ -2.4
RNU6-1028P-201ENST00000517164 DMAC1Q96GE9 116 aa0.07□□□□□ -2.4
RNU6-1028P-201ENST00000517164 A0A1B0GV72 72 aa0.06□□□□□ -2.4
RNU6-1028P-201ENST00000517164 CKS2P33552 79 aa0.06□□□□□ -2.4
RNU6-1028P-201ENST00000517164 RPL22P35268 128 aaKnown RBP0.06□□□□□ -2.4
RNU6-1028P-201ENST00000517164 OR5A2Q8NGI9 324 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms