RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ZNF138P52744 262 aa11.71□□□□□ -0.53
THUMPD3-210ENST00000515662 PAFAH1B2P68402 229 aa11.71□□□□□ -0.53
THUMPD3-210ENST00000515662 LBHQ53QV2 105 aaPredicted RBP11.71□□□□□ -0.54
THUMPD3-210ENST00000515662 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.54
THUMPD3-210ENST00000515662 FAM19A2Q8N3H0 131 aa11.71□□□□□ -0.54
THUMPD3-210ENST00000515662 ZNF738Q8NE65 137 aa11.71□□□□□ -0.54
THUMPD3-210ENST00000515662 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.54
THUMPD3-210ENST00000515662 AKAP9Q99996 3911 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 IGHV4OR15-8A0A075B7B6 117 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 A0A087WW49 117 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 TMEM213A2RRL7 107 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 HAX1O00165 279 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 Q6AWC8 147 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 GPX1P07203 203 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 RAB4AP20338 218 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 Q8N976 141 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 SELENOKQ9Y6D0 94 aa11.7□□□□□ -0.54
THUMPD3-210ENST00000515662 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 M0R143 59 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 AMTP48728 403 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 IGKV3-7A0A075B6H7 116 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 LGALS9O00182 355 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 ARMS2P0C7Q2 107 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 SYNJ2BPP57105 145 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 SRSF2Q01130 221 aaKnown RBP11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 Q6ZSV7 163 aa11.69□□□□□ -0.54
THUMPD3-210ENST00000515662 HOXD3P31249 432 aaPredicted RBP11.68□□□□□ -0.54
THUMPD3-210ENST00000515662 OVOL1O14753 267 aa11.68□□□□□ -0.54
THUMPD3-210ENST00000515662 SRD5A1P18405 259 aa11.68□□□□□ -0.54
THUMPD3-210ENST00000515662 RPS20P60866 119 aaKnown RBP11.68□□□□□ -0.54
THUMPD3-210ENST00000515662 RIGQ13278 110 aa11.68□□□□□ -0.54
THUMPD3-210ENST00000515662 ZNF575Q86XF7 245 aa11.68□□□□□ -0.54
THUMPD3-210ENST00000515662 VAMP8Q9BV40 100 aa11.68□□□□□ -0.54
THUMPD3-210ENST00000515662 BATFQ16520 125 aa11.67□□□□□ -0.54
THUMPD3-210ENST00000515662 TCTEX1D4Q5JR98 221 aa11.67□□□□□ -0.54
THUMPD3-210ENST00000515662 C18orf65Q6ZTR6 163 aa11.67□□□□□ -0.54
THUMPD3-210ENST00000515662 TPPP3Q9BW30 176 aa11.67□□□□□ -0.54
THUMPD3-210ENST00000515662 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
THUMPD3-210ENST00000515662 KCNS1Q96KK3 526 aa11.67□□□□□ -0.54
THUMPD3-210ENST00000515662 SONP18583 2426 aaKnown RBP11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 A0A1B0GW15 77 aa11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 ORM1P02763 201 aa11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 NTF3P20783 257 aa11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 LYZL1Q6UWQ5 148 aa11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 DCANP1Q8TF63 244 aa11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 LINC00477Q96M19 166 aa11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 ALKBH7Q9BT30 221 aaPredicted RBP11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 LENEPQ9Y5L5 61 aa11.66□□□□□ -0.54
THUMPD3-210ENST00000515662 DEFB1P60022 68 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 KLF5Q13887 457 aaPredicted RBP11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 ATOH7Q8N100 152 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 C20orf144Q9BQM9 153 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 MIEN1Q9BRT3 115 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 DEFB136Q30KP8 78 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 LINC01559Q495D7 138 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 SAMD13Q5VXD3 122 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 NIT1Q86X76 327 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 GATD1Q8NB37 220 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 C18orf32Q8TCD1 76 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 BORCS7Q96B45 105 aa11.65□□□□□ -0.54
THUMPD3-210ENST00000515662 FASNP49327 2511 aaKnown RBP11.65□□□□□ -0.55
THUMPD3-210ENST00000515662 HECTD1Q9ULT8 2610 aa11.65□□□□□ -0.55
THUMPD3-210ENST00000515662 IGLC6P0CF74 106 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 MAJINQ3KP22 176 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 C4orf3Q8WVX3 66 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 C2orf70A6NJV1 201 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 ZNF324O75467 553 aaPredicted RBP11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 CTRLP40313 264 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 ID1P41134 155 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 OR8A1Q8NGG7 326 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 MS4A6AQ9H2W1 248 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 C11orf21Q9P2W6 132 aa11.64□□□□□ -0.55
THUMPD3-210ENST00000515662 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 ZNF25P17030 456 aaPredicted RBP11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 SLURP1P55000 103 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 F6UB75 175 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 SCGB2A2Q13296 93 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 PRR9Q5T870 116 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 ACANP16112 2415 aa11.63□□□□□ -0.55
THUMPD3-210ENST00000515662 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 LINC01619G3V211 115 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 ZNF124Q15973 351 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 FAM19A4Q96LR4 140 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 TMEM160Q9NX00 188 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 MYO9AB2RTY4 2548 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 TFPI2P48307 235 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 SPATA45Q537H7 98 aa11.62□□□□□ -0.55
THUMPD3-210ENST00000515662 KHDC1LQ5JSQ8 128 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms