RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 DIRC3C9JPN6 131 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 SLAQ13239 276 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 ZNF266Q14584 549 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 ESRGQ1W209 222 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 PQLC2Q6ZP29 291 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 RPH3ALQ9UNE2 315 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 LENEPQ9Y5L5 61 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 ALG5Q9Y673 324 aa9.49□□□□□ -0.89
TCOF1-215ENST00000515516 PAX4O43316 350 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 MUC21Q5SSG8 566 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 FAM159AQ6UWV7 190 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 OR10G4Q8NGN3 311 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 OR10G9Q8NGN4 311 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 OR10G7Q8NGN6 311 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 ST6GAL2Q96JF0 529 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 MED28Q9H204 178 aa9.48□□□□□ -0.89
TCOF1-215ENST00000515516 MRPL16Q9NX20 251 aaKnown RBP9.48□□□□□ -0.89
TCOF1-215ENST00000515516 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
TCOF1-215ENST00000515516 TRGV11A0A075B6L2 103 aa9.47□□□□□ -0.89
TCOF1-215ENST00000515516 IGHV3-53P01767 116 aa9.47□□□□□ -0.89
TCOF1-215ENST00000515516 TNP2Q05952 138 aa9.47□□□□□ -0.89
TCOF1-215ENST00000515516 Q6ZQT7 251 aa9.47□□□□□ -0.89
TCOF1-215ENST00000515516 TMED6Q8WW62 240 aa9.47□□□□□ -0.89
TCOF1-215ENST00000515516 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
TCOF1-215ENST00000515516 ICOSQ9Y6W8 199 aa9.47□□□□□ -0.89
TCOF1-215ENST00000515516 A0A096LPF7 62 aa9.46□□□□□ -0.9
TCOF1-215ENST00000515516 EIF3GO75821 320 aaKnown RBP eCLIP9.46□□□□□ -0.9
TCOF1-215ENST00000515516 PTTG1O95997 202 aa9.46□□□□□ -0.9
TCOF1-215ENST00000515516 RAB2AP61019 212 aa9.46□□□□□ -0.9
TCOF1-215ENST00000515516 PRO0255Q9UI72 69 aa9.46□□□□□ -0.9
TCOF1-215ENST00000515516 NAGKQ9UJ70 344 aa9.46□□□□□ -0.9
TCOF1-215ENST00000515516 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
TCOF1-215ENST00000515516 TRGV4A0A0C4DH28 118 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 A0A1W2PPQ1 181 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 HMGB3O15347 200 aaKnown RBP9.45□□□□□ -0.9
TCOF1-215ENST00000515516 TMEM183BQ1AE95 376 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 Q6AWC8 147 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 GOLT1AQ6ZVE7 132 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 TMEM183AQ8IXX5 376 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 ARL6IP6Q8N6S5 226 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 SPXQ9BT56 116 aa9.45□□□□□ -0.9
TCOF1-215ENST00000515516 HERC2O95714 4834 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 C16orf90A8MZG2 172 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 MBP02144 154 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
TCOF1-215ENST00000515516 CDC34P49427 236 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-215ENST00000515516 MRPL23Q16540 153 aaKnown RBP9.44□□□□□ -0.9
TCOF1-215ENST00000515516 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 HSD17B11Q8NBQ5 300 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 C8orf49Q96NF6 230 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 NDFIP1Q9BT67 221 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 TREM1Q9NP99 234 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
TCOF1-215ENST00000515516 K7EQM0 130 aa9.43□□□□□ -0.9
TCOF1-215ENST00000515516 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
TCOF1-215ENST00000515516 CRYBA4P53673 196 aa9.43□□□□□ -0.9
TCOF1-215ENST00000515516 INO80EQ8NBZ0 244 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-215ENST00000515516 OR2G3Q8NGZ4 309 aa9.43□□□□□ -0.9
TCOF1-215ENST00000515516 PCNPQ8WW12 178 aaKnown RBP9.43□□□□□ -0.9
TCOF1-215ENST00000515516 AQP10Q96PS8 301 aa9.43□□□□□ -0.9
TCOF1-215ENST00000515516 PSMG3Q9BT73 122 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-215ENST00000515516 NACAE9PAV3 2078 aa9.43□□□□□ -0.9
TCOF1-215ENST00000515516 SERTM2A0A1B0GWG4 89 aa9.42□□□□□ -0.9
TCOF1-215ENST00000515516 SIVA1O15304 175 aa9.42□□□□□ -0.9
TCOF1-215ENST00000515516 SERF2P84101 59 aa9.42□□□□□ -0.9
TCOF1-215ENST00000515516 FHL2Q14192 279 aa9.42□□□□□ -0.9
TCOF1-215ENST00000515516 ASB13Q8WXK3 278 aa9.42□□□□□ -0.9
TCOF1-215ENST00000515516 RASL10AQ92737 203 aa9.42□□□□□ -0.9
TCOF1-215ENST00000515516 SDF2L1Q9HCN8 221 aa9.42□□□□□ -0.9
TCOF1-215ENST00000515516 F6UZH7 168 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 NXPH4O95158 308 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 STAG3L3P0CL85 134 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 ATP6V0CP27449 155 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 GNG5P63218 68 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 TDRG1Q3Y452 100 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 NEGR1Q7Z3B1 354 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 IQCF2Q8IXL9 164 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 RAB24Q969Q5 203 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-215ENST00000515516 TMEM167BQ9NRX6 74 aa9.41□□□□□ -0.9
TCOF1-215ENST00000515516 PKD1P98161 4303 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 TRAV8-1A0A0A6YYK1 113 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 BORCS7-ASMTA0A0B4J1R7 106 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 M0R2P5 195 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 GNRH2O43555 120 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 CXorf1O96002 111 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 ORM1P02763 201 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 GIPP09681 153 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-215ENST00000515516 SFTA3P0C7M3 94 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 GCHFRP30047 84 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 SRIP30626 198 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 C5orf17Q8NAS9 161 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 OR4C5Q8NGB2 326 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 ZNF479Q96JC4 524 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms