RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 LYPD1Q8N2G4 141 aa9.15□□□□□ -0.94
CDK7-213ENST00000515391 EIF4E3Q8N5X7 224 aaKnown RBP9.15□□□□□ -0.94
CDK7-213ENST00000515391 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
CDK7-213ENST00000515391 C11orf72Q8NBR9 251 aa9.15□□□□□ -0.94
CDK7-213ENST00000515391 GNPNAT1Q96EK6 184 aaPredicted RBP9.15□□□□□ -0.94
CDK7-213ENST00000515391 SH3BGRL3Q9H299 93 aa9.15□□□□□ -0.94
CDK7-213ENST00000515391 VPS13DQ5THJ4 4388 aa9.15□□□□□ -0.95
CDK7-213ENST00000515391 A0A0J9YY99 117 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 RGS13O14921 159 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 HOXA5P20719 270 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 SERF2P84101 59 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 MUC21Q5SSG8 566 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 KCNRGQ8N5I3 272 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 OR11H4Q8NGC9 324 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 OR2G3Q8NGZ4 309 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 ARPC5LQ9BPX5 153 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 OTORQ9NRC9 128 aa9.14□□□□□ -0.95
CDK7-213ENST00000515391 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 RBAKDNA6NC62 111 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 MBP02144 154 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 C1QBP02746 253 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 NMBP08949 121 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 ARL14EPLP0DKL9 152 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 CDC34P49427 236 aaPredicted RBP9.13□□□□□ -0.95
CDK7-213ENST00000515391 GNG5P63218 68 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 DAZ2Q13117 558 aaKnown RBP9.13□□□□□ -0.95
CDK7-213ENST00000515391 ANXA2RQ3ZCQ2 193 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 RNF212Q495C1 297 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 RPL7L1Q6DKI1 246 aaKnown RBP9.13□□□□□ -0.95
CDK7-213ENST00000515391 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 ATG101Q9BSB4 218 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 TMPRSS5Q9H3S3 457 aa9.13□□□□□ -0.95
CDK7-213ENST00000515391 TRAV26-1A0A087WT03 109 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 TRGV1A0A0A0MS02 117 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 KANTRA0A1W2PQU2 76 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 SSX7Q7RTT5 188 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 ZNF680Q8NEM1 530 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 CMTM2Q8TAZ6 248 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 RXFP4Q8TDU9 374 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 RAB24Q969Q5 203 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 SGK494Q96LW2 274 aa9.12□□□□□ -0.95
CDK7-213ENST00000515391 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 TRAV8-1A0A0A6YYK1 113 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 RTL8CO15255 209 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 STAG3L2P0CL84 134 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 STAG3L3P0CL85 134 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 TCL1AP56279 114 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 EIF5AP63241 154 aaKnown RBP9.11□□□□□ -0.95
CDK7-213ENST00000515391 LGALS9BQ3B8N2 356 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 Q6ZR54 194 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 TVP23CQ96ET8 276 aa9.11□□□□□ -0.95
CDK7-213ENST00000515391 MRPL16Q9NX20 251 aaKnown RBP9.11□□□□□ -0.95
CDK7-213ENST00000515391 TRGV2A0A075B6R0 118 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 TRBV7-9A0A0J9YWB2 115 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 BCL2L11O43521 198 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 SPINK4O60575 86 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 PFDN1O60925 122 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 GCHFRP30047 84 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 FAM74A1Q5RGS3 127 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 CYTL1Q9NRR1 136 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
CDK7-213ENST00000515391 A0A1B0GVG6 124 aa9.09□□□□□ -0.95
CDK7-213ENST00000515391 F6UZH7 168 aa9.09□□□□□ -0.95
CDK7-213ENST00000515391 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
CDK7-213ENST00000515391 IBA57Q5T440 356 aaKnown RBP9.09□□□□□ -0.95
CDK7-213ENST00000515391 Q6AWC8 147 aa9.09□□□□□ -0.95
CDK7-213ENST00000515391 ZNF471Q9BX82 626 aaPredicted RBP9.09□□□□□ -0.95
CDK7-213ENST00000515391 ACTR3CQ9C0K3 210 aaPredicted RBP9.09□□□□□ -0.95
CDK7-213ENST00000515391 MDFICQ9P1T7 246 aa9.09□□□□□ -0.95
CDK7-213ENST00000515391 NAGKQ9UJ70 344 aa9.09□□□□□ -0.95
CDK7-213ENST00000515391 CCL18P55774 89 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 ZNF415Q09FC8 603 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 ZNF726P1Q15940 193 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 TMEM183BQ1AE95 376 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 TMUB2Q71RG4 321 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 IQCF2Q8IXL9 164 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 TMEM183AQ8IXX5 376 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 ZNRF2Q8NHG8 242 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 LENEPQ9Y5L5 61 aa9.08□□□□□ -0.96
CDK7-213ENST00000515391 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 PRSS29PA6NIE9 313 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 GNRH2O43555 120 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 SEC11BP0C7V7 166 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
CDK7-213ENST00000515391 SUMO1P63165 101 aaKnown RBP9.07□□□□□ -0.96
CDK7-213ENST00000515391 ZFP69Q49AA0 526 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 AKR1C8PQ5T2L2 129 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 LINC00336Q6ZUF6 198 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 SUN5Q8TC36 379 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 TMED6Q8WW62 240 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 TREM1Q9NP99 234 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 DNAH10Q8IVF4 4471 aa9.07□□□□□ -0.96
CDK7-213ENST00000515391 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
CDK7-213ENST00000515391 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
CDK7-213ENST00000515391 CXorf1O96002 111 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms