RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 SYS1-DBNDD2H3BUS1 97 aa12.75□□□□□ -0.37
TRIM41-207ENST00000515223 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
TRIM41-207ENST00000515223 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
TRIM41-207ENST00000515223 EDA2RQ9HAV5 297 aa12.75□□□□□ -0.37
TRIM41-207ENST00000515223 FAM231BA6NCW3 169 aa12.75□□□□□ -0.37
TRIM41-207ENST00000515223 Q0VG73 95 aa12.75□□□□□ -0.37
TRIM41-207ENST00000515223 TRAV8-3A0A0A6YYJ7 113 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 MED13LQ71F56 2210 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 GAGE2EQ4V326 116 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 GAGE2DQ9UEU5 116 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 IGLV3-1P01715 115 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 IGHV4-59P01825 116 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 DUX4L9Q6RFH8 374 aaPredicted RBP12.74□□□□□ -0.37
TRIM41-207ENST00000515223 C2orf66Q6UXQ4 117 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 ZNF48Q96MX3 618 aaPredicted RBP12.74□□□□□ -0.37
TRIM41-207ENST00000515223 COX11Q9Y6N1 276 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 PRSS46E5RG02 174 aa12.74□□□□□ -0.37
TRIM41-207ENST00000515223 ANXA2RQ3ZCQ2 193 aa12.73□□□□□ -0.37
TRIM41-207ENST00000515223 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
TRIM41-207ENST00000515223 BDP1A6H8Y1 2624 aa12.73□□□□□ -0.37
TRIM41-207ENST00000515223 H3BMM0 161 aa12.73□□□□□ -0.37
TRIM41-207ENST00000515223 WDR86Q86TI4 376 aa12.73□□□□□ -0.37
TRIM41-207ENST00000515223 C22orf46C9J442 243 aa12.73□□□□□ -0.37
TRIM41-207ENST00000515223 RBMY1FQ15415 496 aaKnown RBP12.72□□□□□ -0.37
TRIM41-207ENST00000515223 RHOHQ15669 191 aa12.72□□□□□ -0.37
TRIM41-207ENST00000515223 C18orf32Q8TCD1 76 aa12.72□□□□□ -0.37
TRIM41-207ENST00000515223 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
TRIM41-207ENST00000515223 SRSF2Q01130 221 aaKnown RBP12.72□□□□□ -0.37
TRIM41-207ENST00000515223 TCF15Q12870 199 aa12.72□□□□□ -0.37
TRIM41-207ENST00000515223 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
TRIM41-207ENST00000515223 PRSS29PA6NIE9 313 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 UBE2BP63146 152 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 TEX48A0A1B0GUV7 120 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 CT83Q5H943 113 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 DKK4Q9UBT3 224 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 A0A096LPF7 62 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 IGHV3-38A0A0C4DH36 116 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 TMEM213A2RRL7 107 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 NDUFS7O75251 213 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.37
TRIM41-207ENST00000515223 IGKV2D-24A0A075B6R9 120 aa12.71□□□□□ -0.38
TRIM41-207ENST00000515223 H3BRN7 92 aa12.71□□□□□ -0.38
TRIM41-207ENST00000515223 PRB1P04280 392 aa12.71□□□□□ -0.38
TRIM41-207ENST00000515223 LYPD6Q86Y78 171 aa12.71□□□□□ -0.38
TRIM41-207ENST00000515223 PRR25Q96S07 402 aa12.71□□□□□ -0.38
TRIM41-207ENST00000515223 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.71□□□□□ -0.38
TRIM41-207ENST00000515223 NXPH4O95158 308 aa12.71□□□□□ -0.38
TRIM41-207ENST00000515223 SUMO4Q6EEV6 95 aa12.71□□□□□ -0.38
TRIM41-207ENST00000515223 MMP23AO75900 390 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 GAGE2BQ13066 116 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 FAM120AOSQ5T036 256 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 V9GYV3 84 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 ANAPC13Q9BS18 74 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 IGLC2P0DOY2 106 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 IGLC3P0DOY3 106 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 FAM104BQ5XKR9 115 aa12.7□□□□□ -0.38
TRIM41-207ENST00000515223 ALPK3Q96L96 1907 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 IGKV1OR2-108A0A075B7D4 117 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 Q8N8P6 123 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 SHISA9B4DS77 424 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 MAJINQ3KP22 176 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 IGHV1-24A0A0C4DH33 117 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 TAL2Q16559 108 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 ZFHX2Q9C0A1 2572 aaPredicted RBP12.69□□□□□ -0.38
TRIM41-207ENST00000515223 WT1-ASQ06250 92 aa12.69□□□□□ -0.38
TRIM41-207ENST00000515223 ZNF134P52741 427 aa12.68□□□□□ -0.38
TRIM41-207ENST00000515223 PIFOQ8TCI5 191 aa12.68□□□□□ -0.38
TRIM41-207ENST00000515223 HOXB4P17483 251 aaPredicted RBP12.68□□□□□ -0.38
TRIM41-207ENST00000515223 IGF2-ASQ6U949 168 aa12.68□□□□□ -0.38
TRIM41-207ENST00000515223 MALRD1Q5VYJ5 2156 aa12.68□□□□□ -0.38
TRIM41-207ENST00000515223 CCL18P55774 89 aa12.68□□□□□ -0.38
TRIM41-207ENST00000515223 SIGMAR1Q99720 223 aa12.68□□□□□ -0.38
TRIM41-207ENST00000515223 TPSG1Q9NRR2 321 aa12.68□□□□□ -0.38
TRIM41-207ENST00000515223 GP9P14770 177 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 GRNP28799 593 aaKnown RBP12.67□□□□□ -0.38
TRIM41-207ENST00000515223 OCIAD2Q56VL3 154 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 DENND4AQ7Z401 1863 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 IGHV4-61A0A0C4DH41 118 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 GAGE2AQ6NT46 116 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 Q6ZVH6 145 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 ACACBO00763 2458 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 A0A0J9YY99 117 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 K7EN84 100 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 FOXE3Q13461 319 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
TRIM41-207ENST00000515223 PYGO2Q9BRQ0 406 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 SOCS3O14543 225 aa12.67□□□□□ -0.38
TRIM41-207ENST00000515223 NOP10Q9NPE3 64 aaKnown RBP12.67□□□□□ -0.38
TRIM41-207ENST00000515223 STPG4Q8N801 248 aa12.66□□□□□ -0.38
TRIM41-207ENST00000515223 C1orf43Q9BWL3 253 aa12.66□□□□□ -0.38
TRIM41-207ENST00000515223 NUPR1O60356 82 aa12.66□□□□□ -0.38
TRIM41-207ENST00000515223 GTF3C1Q12789 2109 aa12.66□□□□□ -0.38
TRIM41-207ENST00000515223 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
TRIM41-207ENST00000515223 TRAV25A0A0B4J276 109 aa12.66□□□□□ -0.38
TRIM41-207ENST00000515223 IGLC1P0CG04 106 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms