RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 KLF12Q9Y4X4 402 aa10.15□□□□□ -0.78
SGCA-211ENST00000514934 NBDYA0A0U1RRE5 68 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 RBAKDNA6NC62 111 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 C17orf112F2Z3M2 114 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 H3BNG1 76 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 M6PRP20645 277 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 ZNF138P52744 262 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 CCDC28AQ8IWP9 274 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 LYPD1Q8N2G4 141 aa10.14□□□□□ -0.79
SGCA-211ENST00000514934 SNURFLB1AK76 121 aa10.13□□□□□ -0.79
SGCA-211ENST00000514934 DIRC3C9JPN6 131 aa10.13□□□□□ -0.79
SGCA-211ENST00000514934 OR7C2O60412 319 aa10.13□□□□□ -0.79
SGCA-211ENST00000514934 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
SGCA-211ENST00000514934 UBE2L3P68036 154 aaKnown RBP10.13□□□□□ -0.79
SGCA-211ENST00000514934 ZNF266Q14584 549 aa10.13□□□□□ -0.79
SGCA-211ENST00000514934 Q5BKY6 102 aa10.13□□□□□ -0.79
SGCA-211ENST00000514934 IBA57Q5T440 356 aaKnown RBP10.13□□□□□ -0.79
SGCA-211ENST00000514934 ZNF680Q8NEM1 530 aa10.13□□□□□ -0.79
SGCA-211ENST00000514934 GPX1P07203 203 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 RAB2AP61019 212 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 ESRGQ1W209 222 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 KHDC3LQ587J8 217 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 SSX7Q7RTT5 188 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 TVP23CQ96ET8 276 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 UPK3BQ9BT76 320 aa10.12□□□□□ -0.79
SGCA-211ENST00000514934 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 A0A096LPF7 62 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 A0A0D9SG52 128 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 A0A0J9YY99 117 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 G3V3Q6 166 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 TNP2Q05952 138 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 OR5I1Q13606 314 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 ZNF345Q14585 488 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 C1orf134Q5TEV5 83 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 Q6AWC8 147 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 C9orf62Q8N4C0 152 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 OR2G3Q8NGZ4 309 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 SUN5Q8TC36 379 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 GNPNAT1Q96EK6 184 aaPredicted RBP10.11□□□□□ -0.79
SGCA-211ENST00000514934 AQP10Q96PS8 301 aa10.11□□□□□ -0.79
SGCA-211ENST00000514934 IFNA5P01569 189 aa10.1□□□□□ -0.79
SGCA-211ENST00000514934 CCL18P55774 89 aa10.1□□□□□ -0.79
SGCA-211ENST00000514934 SCGB1C1Q8TD33 95 aa10.1□□□□□ -0.79
SGCA-211ENST00000514934 TMED6Q8WW62 240 aa10.1□□□□□ -0.79
SGCA-211ENST00000514934 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
SGCA-211ENST00000514934 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
SGCA-211ENST00000514934 LENEPQ9Y5L5 61 aa10.1□□□□□ -0.79
SGCA-211ENST00000514934 TRGV1A0A0A0MS02 117 aa10.09□□□□□ -0.79
SGCA-211ENST00000514934 MDFICQ9P1T7 246 aa10.09□□□□□ -0.79
SGCA-211ENST00000514934 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
SGCA-211ENST00000514934 RNF222A6NCQ9 220 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 TAS2R45P59539 299 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 TDRG1Q3Y452 100 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 PQLC2Q6ZP29 291 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 ZNF575Q86XF7 245 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 SLC7A5P1Q8MH63 180 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 INO80EQ8NBZ0 244 aaPredicted RBP10.08□□□□□ -0.8
SGCA-211ENST00000514934 OR11H4Q8NGC9 324 aa10.08□□□□□ -0.8
SGCA-211ENST00000514934 MRPL16Q9NX20 251 aaKnown RBP10.08□□□□□ -0.8
SGCA-211ENST00000514934 MRPS16Q9Y3D3 137 aaKnown RBP10.08□□□□□ -0.8
SGCA-211ENST00000514934 TRAV8-1A0A0A6YYK1 113 aa10.07□□□□□ -0.8
SGCA-211ENST00000514934 HMGB3O15347 200 aaKnown RBP10.07□□□□□ -0.8
SGCA-211ENST00000514934 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
SGCA-211ENST00000514934 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
SGCA-211ENST00000514934 FHL2Q14192 279 aa10.07□□□□□ -0.8
SGCA-211ENST00000514934 ACOT6Q3I5F7 207 aaPredicted RBP10.07□□□□□ -0.8
SGCA-211ENST00000514934 LGALSLQ3ZCW2 172 aaPredicted RBP10.07□□□□□ -0.8
SGCA-211ENST00000514934 C6orf223Q8N319 242 aa10.07□□□□□ -0.8
SGCA-211ENST00000514934 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
SGCA-211ENST00000514934 Q9H8V8 135 aa10.07□□□□□ -0.8
SGCA-211ENST00000514934 TNFSF18Q9UNG2 199 aa10.07□□□□□ -0.8
SGCA-211ENST00000514934 PGPA6NDG6 321 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 TAAR5O14804 337 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 IGLV2-11P01706 119 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 MED14OSP0DP75 135 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 ATP6V0CP27449 155 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 CSN1S1P47710 185 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 GNG5P63218 68 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 MUC21Q5SSG8 566 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 KCNRGQ8N5I3 272 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 OR10G4Q8NGN3 311 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 OR10G9Q8NGN4 311 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 OR10G7Q8NGN6 311 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 SH3BGRL3Q9H299 93 aa10.06□□□□□ -0.8
SGCA-211ENST00000514934 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 IFNA7P01567 189 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 CRYBA4P53673 196 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 EIF5AP63241 154 aaKnown RBP10.05□□□□□ -0.8
SGCA-211ENST00000514934 SOHLH1Q5JUK2 328 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 Q6ZRN7 208 aaPredicted RBP10.05□□□□□ -0.8
SGCA-211ENST00000514934 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 HSD17B11Q8NBQ5 300 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 RASL10AQ92737 203 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 RAB24Q969Q5 203 aa10.05□□□□□ -0.8
SGCA-211ENST00000514934 FXYD6-FXYD2A0A087WZ82 144 aa10.04□□□□□ -0.8
SGCA-211ENST00000514934 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms