RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 TMEM256Q8N2U0 113 aa8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 TP53TG1Q9Y2A0 90 aa8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 NBEAL2Q6ZNJ1 2754 aa8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 C7orf71A4D174 169 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 ZNF324O75467 553 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 CA1P00915 261 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 INSP01308 110 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 IGLV2-8P01709 118 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 GPX1P07203 203 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 GNG4P50150 75 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 SMUG1Q53HV7 270 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 CENPWQ5EE01 88 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 GFI1BQ5VTD9 330 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 BAGE2Q86Y30 109 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 SGK494Q96LW2 274 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 B9D2Q9BPU9 175 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 LINC00467Q9BRT7 94 aa8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-220ENST00000514830 NDUFA5Q16718 116 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 DEFB121Q5J5C9 76 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 PRR9Q5T870 116 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 RNF183Q96D59 192 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 ASCL2Q99929 193 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 SMIM7Q9BQ49 75 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 BIN3Q9NQY0 253 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 XCL2Q9UBD3 114 aa8.72□□□□□ -1.01
PDLIM5-220ENST00000514830 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 ZNF727A8MUV8 499 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 PFN1P07737 140 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 SFTA3P0C7M3 94 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 KIR3DS1Q14943 382 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 ZNF674Q2M3X9 581 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 SOHLH1Q5JUK2 328 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 C1orf158Q8N1D5 194 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 ZC2HC1AQ96GY0 325 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 C8orf49Q96NF6 230 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 NEU1Q99519 415 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 COL7A1Q02388 2944 aa8.71□□□□□ -1.02
PDLIM5-220ENST00000514830 TRAV12-2A0A075B6T6 113 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 TMEM218A2RU14 115 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 H7BYZ3 331 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 GCGP01275 180 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 RNASE4P34096 147 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 FXYD7P58549 80 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 BTN1A1Q13410 526 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 TDRG1Q3Y452 100 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 PYGO2Q9BRQ0 406 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 NIPSNAP3BQ9BS92 247 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 GOLT1BQ9Y3E0 138 aa8.7□□□□□ -1.02
PDLIM5-220ENST00000514830 TRAV12-3A0A0B4J271 114 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 SMIM9A6NGZ8 99 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 SPRY2O43597 315 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 RBMY1A1P0DJD3 496 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 RBMY1CP0DJD4 496 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 CRIP1P50238 77 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 RBMY1FQ15415 496 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 TMEM241Q24JQ0 296 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 FAM162BQ5T6X4 162 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 OCC1Q8TAD7 63 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 TENM3Q9P273 2699 aa8.69□□□□□ -1.02
PDLIM5-220ENST00000514830 C19orf71A6NCJ1 209 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 NHLRC4P0CG21 123 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 CEBPGP53567 150 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 DEFB135Q30KP9 77 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 C10orf91Q5T1B1 145 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 OVOL2Q9BRP0 275 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 SEC11CQ9BY50 192 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 TP53TG3Q9ULZ0 132 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 X6R8D5 127 aa8.68□□□□□ -1.02
PDLIM5-220ENST00000514830 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 K7EN84 100 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 SH2D1AO60880 128 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 CXCL1P09341 107 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 PNRC1Q12796 327 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 ANXA2RQ3ZCQ2 193 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 FAM231DQ6ZW35 169 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 NHLRC2Q8NBF2 726 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 KCNS1Q96KK3 526 aa8.67□□□□□ -1.02
PDLIM5-220ENST00000514830 IGHV1OR15-1A0A075B7D0 117 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 J3KRW8 73 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 MIFP14174 115 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 ADCYAP1P18509 176 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 RPL23P62829 140 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 DNLZQ5SXM8 178 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 ZNF493Q6ZR52 646 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 TMEM208Q9BTX3 173 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 C11orf21Q9P2W6 132 aa8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 CARHSP1Q9Y2V2 147 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-220ENST00000514830 MGST1P10620 155 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms