RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 TSSC4Q9Y5U2 329 aaPredicted RBP10.9□□□□□ -0.66
TSPAN17-208ENST00000514705 H3BMG7 143 aa10.9□□□□□ -0.66
TSPAN17-208ENST00000514705 CRIP1P50238 77 aa10.9□□□□□ -0.66
TSPAN17-208ENST00000514705 SRSF1Q07955 248 aaKnown RBP eCLIP10.9□□□□□ -0.66
TSPAN17-208ENST00000514705 C3orf36Q3SXR2 165 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 DPF1Q92782 380 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 TMEM238LA0A1B0GVL6 79 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 A6NJY4 79 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 SPRY2O43597 315 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 ATP5J2P56134 94 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 HERVK_113P61574 105 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 DTX2Q86UW9 622 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 OR10J6PQ8NGY7 276 aa10.89□□□□□ -0.67
TSPAN17-208ENST00000514705 IGLV2-11P01706 119 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 CD300EQ496F6 205 aaPredicted RBP10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 Q8NA96 180 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 A0A1B0GV72 72 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 EMP1P54849 157 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 RNF5Q99942 180 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 PSMG4Q5JS54 123 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 TMEM170BQ5T4T1 132 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 NPFFR1Q9GZQ6 430 aa10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
TSPAN17-208ENST00000514705 TRBV25-1A0A075B6N4 114 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 FAM74A4Q5TZK3 123 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 SMPXQ9UHP9 88 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 THBDP07204 575 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 HTN1P15515 57 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 RAB9AP51151 201 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 CCL19Q99731 98 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 ZNF815PA8K554 130 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 DYNAPQ8N1N2 210 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 KAAG1Q9UBP8 84 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 PCSK5Q92824 1860 aa10.87□□□□□ -0.67
TSPAN17-208ENST00000514705 LYRM7Q5U5X0 104 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 C8orf31Q8N9H6 132 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 IGLV1-47P01700 117 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 AZU1P20160 251 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 ZNF562Q6V9R5 426 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 WFDC12Q8WWY7 111 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 SIVA1O15304 175 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 FOXE3Q13461 319 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 VMO1Q7Z5L0 202 aa10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 C14orf178Q8N769 122 aaPredicted RBP10.86□□□□□ -0.67
TSPAN17-208ENST00000514705 ZNF80P51504 273 aaPredicted RBP10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 EEF1AKMT3Q96AZ1 226 aa10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 SLC50A1Q9BRV3 221 aa10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 FSTL3O95633 263 aa10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 RNASE4P34096 147 aaKnown RBP10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 ATP5G2Q06055 141 aa10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 WFDC2Q14508 124 aa10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
TSPAN17-208ENST00000514705 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 G3V4G9 280 aa10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 IGHV3-11P01762 117 aa10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 CEND1Q8N111 149 aa10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 BEX4Q9NWD9 120 aaPredicted RBP10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 ASIPP42127 132 aa10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 Q8N8P6 123 aa10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 SRSF8Q9BRL6 282 aaKnown RBP10.84□□□□□ -0.67
TSPAN17-208ENST00000514705 PF4V1P10720 104 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 CFHR4Q92496 578 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 TRGV3P03979 118 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 LY6EQ16553 131 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 G3V318 75 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 PRORYQ9H606 182 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 CSPG4Q6UVK1 2322 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 PIMREGQ9BSJ6 248 aa10.83□□□□□ -0.68
TSPAN17-208ENST00000514705 GAGE12HA6NDE8 117 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 SHISA9B4DS77 424 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 H7C1H1 209 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 SRD5A1P18405 259 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 ZNF493Q6ZR52 646 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 GAS8-AS1O95177 125 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 ODF1Q14990 250 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 TMEM219Q86XT9 240 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 PRSS2P07478 247 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 PLNP26678 52 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 C12orf74Q32Q52 190 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 ORMDL2Q53FV1 153 aa10.82□□□□□ -0.68
TSPAN17-208ENST00000514705 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 ZNF256Q9Y2P7 627 aaPredicted RBP10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 SORL1Q92673 2214 aa10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 NDUFS8O00217 210 aa10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 PRB1P04280 392 aa10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 PTPRBP23467 1997 aa10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 KIR2DL4Q99706 377 aa10.81□□□□□ -0.68
TSPAN17-208ENST00000514705 LGALS3P17931 250 aaKnown RBP10.8□□□□□ -0.68
TSPAN17-208ENST00000514705 PRTN3P24158 256 aa10.8□□□□□ -0.68
TSPAN17-208ENST00000514705 IGLL5B9A064 214 aa10.8□□□□□ -0.68
TSPAN17-208ENST00000514705 CTSGP08311 255 aa10.8□□□□□ -0.68
TSPAN17-208ENST00000514705 TMEM190Q8WZ59 177 aa10.8□□□□□ -0.68
TSPAN17-208ENST00000514705 IGHV3-64A0A075B6Q5 118 aa10.79□□□□□ -0.68
TSPAN17-208ENST00000514705 WI2-2373I1.2A0A1W2PRP0 233 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms