RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 Q86TA4 180 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 TMEM183AQ8IXX5 376 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 ZFP30Q9Y2G7 519 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
CCL28-204ENST00000514421 TRAV34A0A0B4J273 112 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 A0A1W2PPQ1 181 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 FAM231BA6NCW3 169 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 RBMY1BA6NDE4 496 aaKnown RBP6.17□□□□□ -1.42
CCL28-204ENST00000514421 RBMY1EA6NEQ0 496 aaKnown RBP6.17□□□□□ -1.42
CCL28-204ENST00000514421 DIRC3C9JPN6 131 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 RBMY1DP0C7P1 496 aaKnown RBP6.17□□□□□ -1.42
CCL28-204ENST00000514421 HOXA5P20719 270 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 UBE2G1P62253 170 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 PSG3Q16557 428 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 ODF3L2Q3SX64 289 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 COX19Q49B96 90 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 IBA57Q5T440 356 aaKnown RBP6.17□□□□□ -1.42
CCL28-204ENST00000514421 RASL11AQ6T310 242 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 EXOC3-AS1Q8N2X6 119 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 CMTM2Q8TAZ6 248 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 GLMPQ8WWB7 406 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 FRZBQ92765 325 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 MRPL53Q96EL3 112 aaKnown RBP6.17□□□□□ -1.42
CCL28-204ENST00000514421 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
CCL28-204ENST00000514421 AAMDCQ9H7C9 122 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 ZMAT4Q9H898 229 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 ZNF331Q9NQX6 463 aaPredicted RBP6.17□□□□□ -1.42
CCL28-204ENST00000514421 CLEC5AQ9NY25 188 aa6.17□□□□□ -1.42
CCL28-204ENST00000514421 LOC102724200A0A096LPH7 203 aaPredicted RBP6.16□□□□□ -1.42
CCL28-204ENST00000514421 RBAKDNA6NC62 111 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 K7EQG2 157 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 K7EQM0 130 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 S100A6P06703 90 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 TRGC1P0CF51 173 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 SNRPEP62304 92 aaKnown RBP6.16□□□□□ -1.42
CCL28-204ENST00000514421 OR8I2Q8N0Y5 310 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 OR4B1Q8NGF8 309 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 TSKUQ8WUA8 353 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 TM2D3Q9BRN9 247 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 SLC50A1Q9BRV3 221 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 GNB1LQ9BYB4 327 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 GFRA4Q9GZZ7 299 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 WFDC10AQ9H1F0 79 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 PPP1R14DQ9NXH3 145 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 U3KQK5 164 aa6.16□□□□□ -1.42
CCL28-204ENST00000514421 NBEAL2Q6ZNJ1 2754 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 H3BTX0 84 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 MT-ND6P03923 174 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 SNRPCP09234 159 aaKnown RBP6.15□□□□□ -1.42
CCL28-204ENST00000514421 MGST1P10620 155 aaKnown RBP6.15□□□□□ -1.42
CCL28-204ENST00000514421 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.42
CCL28-204ENST00000514421 DEFB131AP59861 70 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 RPL19P84098 196 aaKnown RBP6.15□□□□□ -1.42
CCL28-204ENST00000514421 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 GOLT1AQ6ZVE7 132 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 APRG1Q8IVJ8 170 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 SPATA25Q9BR10 227 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 SAV1Q9H4B6 383 aaPredicted RBP6.15□□□□□ -1.42
CCL28-204ENST00000514421 MAP6D1Q9H9H5 199 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 NRN1Q9NPD7 142 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 PSG8Q9UQ74 426 aa6.15□□□□□ -1.42
CCL28-204ENST00000514421 ZNF705GA8MUZ8 300 aaPredicted RBP6.14□□□□□ -1.43
CCL28-204ENST00000514421 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
CCL28-204ENST00000514421 S100A8P05109 93 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 ID1P41134 155 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 CSN1S1P47710 185 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 SNRPD3P62318 126 aaKnown RBP6.14□□□□□ -1.43
CCL28-204ENST00000514421 FABP9Q0Z7S8 132 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 SMUG1Q53HV7 270 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 WDR73Q6P4I2 378 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 ATP5L2Q7Z4Y8 100 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 RPP21Q9H633 154 aaKnown RBP6.14□□□□□ -1.43
CCL28-204ENST00000514421 NAT8BQ9UHF3 227 aa6.14□□□□□ -1.43
CCL28-204ENST00000514421 TRAV8-1A0A0A6YYK1 113 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 TRAV8-2A0A0B4J237 113 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 KIR2DL5BA0A0G2JN68 375 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 KIR2DL5BA0A0G2JPC4 375 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 A0A1B0GXF2 115 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 IFITM10A6NMD0 228 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 A8MWL6 223 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 M0R3E3 92 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 ZNF688P0C7X2 276 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 RPL35AP18077 110 aaKnown RBP6.13□□□□□ -1.43
CCL28-204ENST00000514421 APOC4P55056 127 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 ZNF124Q15973 351 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 SAPCD1Q5SSQ6 148 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 SAMD13Q5VXD3 122 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 TMEM136Q6ZRR5 245 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 LINC00518Q8N0U6 118 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 KIR2DL5AQ8N109 375 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 HIST3H2BBQ8N257 126 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 NHLRC2Q8NBF2 726 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 KIR2DL5BQ8NHK3 375 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 ZC2HC1AQ96GY0 325 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 RCHY1Q96PM5 261 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 CSTL1Q9H114 145 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms