RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 VPREB1P12018 145 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 CRISP2P16562 243 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 FXYD7P58549 80 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 RANP62826 216 aaKnown RBP5.89□□□□□ -1.47
NEDD4-210ENST00000513957 CEMP1Q6PRD7 247 aaPredicted RBP5.89□□□□□ -1.47
NEDD4-210ENST00000513957 DPPA3Q6W0C5 159 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 BAP18Q8IXM2 172 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 TMEM263Q8WUH6 116 aaKnown RBP5.89□□□□□ -1.47
NEDD4-210ENST00000513957 C16orf74Q96GX8 76 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 ST6GAL2Q96JF0 529 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 FAM19A4Q96LR4 140 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 PYGO2Q9BRQ0 406 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 NIPSNAP3BQ9BS92 247 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 NKX6-2Q9C056 277 aaPredicted RBP5.89□□□□□ -1.47
NEDD4-210ENST00000513957 CYTL1Q9NRR1 136 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 ARL2-SNX15V9GYD0 113 aa5.89□□□□□ -1.47
NEDD4-210ENST00000513957 IGHV3OR16-12A0A075B7B8 117 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 LYRM9A8MSI8 78 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 SMLR1H3BR10 107 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 C1QBP02746 253 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 CT45A10P0DMU9 189 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 TPT1P13693 172 aaKnown RBP5.88□□□□□ -1.47
NEDD4-210ENST00000513957 GCHFRP30047 84 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 ZNF138P52744 262 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 GFI1BQ5VTD9 330 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 ZFAND6Q6FIF0 208 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 EIF5AL1Q6IS14 154 aaKnown RBP5.88□□□□□ -1.47
NEDD4-210ENST00000513957 C5orf17Q8NAS9 161 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 OR11H4Q8NGC9 324 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 STOML3Q8TAV4 291 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 PHLDA1Q8WV24 401 aaPredicted RBP5.88□□□□□ -1.47
NEDD4-210ENST00000513957 HYLS1Q96M11 299 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 LINC00467Q9BRT7 94 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 TCEAL7Q9BRU2 100 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 ZNF492Q9P255 531 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
NEDD4-210ENST00000513957 TRAV12-2A0A075B6T6 113 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 IGKV2-40A0A087WW87 121 aaPredicted RBP5.87□□□□□ -1.47
NEDD4-210ENST00000513957 TRAV10A0A0B4J240 114 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 A0A1W2PRE2 83 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 C7orf71A4D174 169 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 C5orf52A6NGY3 159 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 CBY3A6NI87 242 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 K7EQM0 130 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 PFDN1O60925 122 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 IGKV2D-40P01614 121 aaPredicted RBP5.87□□□□□ -1.47
NEDD4-210ENST00000513957 MAJINQ3KP22 176 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 LGALSLQ3ZCW2 172 aaPredicted RBP5.87□□□□□ -1.47
NEDD4-210ENST00000513957 AKAP14Q86UN6 197 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 ZNF680Q8NEM1 530 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 OCC1Q8TAD7 63 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 FAM210BQ96KR6 192 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 LINC01587Q99440 93 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 ZNF471Q9BX82 626 aaPredicted RBP5.87□□□□□ -1.47
NEDD4-210ENST00000513957 AGPAT4-IT1Q9H0P7 198 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 DKK2Q9UBU2 259 aa5.87□□□□□ -1.47
NEDD4-210ENST00000513957 YTHDF2Q9Y5A9 579 aaKnown RBP5.87□□□□□ -1.47
NEDD4-210ENST00000513957 PGPA6NDG6 321 aa5.86□□□□□ -1.47
NEDD4-210ENST00000513957 DEFB4AO15263 64 aa5.86□□□□□ -1.47
NEDD4-210ENST00000513957 GPX1P07203 203 aa5.86□□□□□ -1.47
NEDD4-210ENST00000513957 RAB5CP51148 216 aa5.86□□□□□ -1.47
NEDD4-210ENST00000513957 NANOS2P60321 138 aaKnown RBP5.86□□□□□ -1.47
NEDD4-210ENST00000513957 ZFAND2AQ8N6M9 145 aa5.86□□□□□ -1.47
NEDD4-210ENST00000513957 RNASE8Q8TDE3 154 aaKnown RBP5.86□□□□□ -1.47
NEDD4-210ENST00000513957 NDFIP1Q9BT67 221 aa5.86□□□□□ -1.47
NEDD4-210ENST00000513957 TIMM8BQ9Y5J9 83 aaPredicted RBP5.86□□□□□ -1.47
NEDD4-210ENST00000513957 LCE6AA0A183 80 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 MAP1LC3B2A6NCE7 125 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 HMGB3O15347 200 aaKnown RBP5.85□□□□□ -1.47
NEDD4-210ENST00000513957 ZNF324O75467 553 aaPredicted RBP5.85□□□□□ -1.47
NEDD4-210ENST00000513957 FHITP49789 147 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 PPT1P50897 306 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 ERCC8Q13216 396 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 ZNF726P1Q15940 193 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 C12orf74Q32Q52 190 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 ANXA2RQ3ZCQ2 193 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 IBA57Q5T440 356 aaKnown RBP5.85□□□□□ -1.47
NEDD4-210ENST00000513957 FAM222AQ5U5X8 452 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 Q6AWC8 147 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 Q6ZTC4 211 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 TMUB2Q71RG4 321 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 CYB561D1Q8N8Q1 229 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 VGLL1Q99990 258 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 ATG101Q9BSB4 218 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 MAP1LC3BQ9GZQ8 125 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 CELA1Q9UNI1 258 aa5.85□□□□□ -1.47
NEDD4-210ENST00000513957 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
NEDD4-210ENST00000513957 TRGV11A0A075B6L2 103 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 TRAV12-3A0A0B4J271 114 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 PLAC8L1A1L4L8 177 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 ZNF705GA8MUZ8 300 aaPredicted RBP5.84□□□□□ -1.47
NEDD4-210ENST00000513957 SNURFLB1AK76 121 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 GGTLC3B5MD39 225 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 TEX46H3BTG2 121 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 TCRAP04437 139 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 DAD1P61803 113 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 DAZ2Q13117 558 aaKnown RBP5.84□□□□□ -1.47
NEDD4-210ENST00000513957 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 SLC51BQ86UW2 128 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 IQCF2Q8IXL9 164 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms