RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 AMBPP02760 352 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 GIG44P09565 113 aaPredicted RBP9.18□□□□□ -0.94
PDPN-210ENST00000513143 FXYD7P58549 80 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 TMEM183AQ8IXX5 376 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 KIR2DL5AQ8N109 375 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 KIR2DL5BQ8NHK3 375 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 C8orf49Q96NF6 230 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 CSTL1Q9H114 145 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 CRXO43186 299 aaPredicted RBP9.17□□□□□ -0.94
PDPN-210ENST00000513143 IGLV2-8P01709 118 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 GPX1P07203 203 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 APOC4P55056 127 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 KIR3DS1Q14943 382 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 SMUG1Q53HV7 270 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 PRR9Q5T870 116 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
PDPN-210ENST00000513143 PGPEP1LA6NFU8 196 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 FRMD6-AS1P0C7T7 363 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 TMEM241Q24JQ0 296 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 NHLRC2Q8NBF2 726 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 OCC1Q8TAD7 63 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 ZC2HC1AQ96GY0 325 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 XCL2Q9UBD3 114 aa9.16□□□□□ -0.94
PDPN-210ENST00000513143 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 C7orf71A4D174 169 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 J3KRW8 73 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 UBE2CO00762 179 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 ADCYAP1P18509 176 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.94
PDPN-210ENST00000513143 ZNF80P51504 273 aaPredicted RBP9.15□□□□□ -0.94
PDPN-210ENST00000513143 BTN1A1Q13410 526 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 Q6AWC8 147 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 SEC11CQ9BY50 192 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
PDPN-210ENST00000513143 F8W036 122 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 K7EN84 100 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
PDPN-210ENST00000513143 CA1P00915 261 aaPredicted RBP9.14□□□□□ -0.95
PDPN-210ENST00000513143 GCGP01275 180 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 CRIP1P50238 77 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 DEFB121Q5J5C9 76 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 C10orf91Q5T1B1 145 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 LINC01551Q86U37 167 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 C20orf144Q9BQM9 153 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 NIPSNAP3BQ9BS92 247 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 SDF2L1Q9HCN8 221 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 BIN3Q9NQY0 253 aa9.14□□□□□ -0.95
PDPN-210ENST00000513143 TRAV12-3A0A0B4J271 114 aa9.13□□□□□ -0.95
PDPN-210ENST00000513143 INSP01308 110 aa9.13□□□□□ -0.95
PDPN-210ENST00000513143 PFN1P07737 140 aaKnown RBP9.13□□□□□ -0.95
PDPN-210ENST00000513143 RBMY1A1P0DJD3 496 aaKnown RBP9.13□□□□□ -0.95
PDPN-210ENST00000513143 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
PDPN-210ENST00000513143 MGST1P10620 155 aaKnown RBP9.13□□□□□ -0.95
PDPN-210ENST00000513143 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
PDPN-210ENST00000513143 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
PDPN-210ENST00000513143 FAM162BQ5T6X4 162 aa9.13□□□□□ -0.95
PDPN-210ENST00000513143 TRAV21A0A0B4J279 112 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 KRBOX1C9JBD0 128 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 OR5I1Q13606 314 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 Q6ZQT7 251 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 Q6ZWC4 215 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 C1orf158Q8N1D5 194 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
PDPN-210ENST00000513143 CARHSP1Q9Y2V2 147 aaKnown RBP9.12□□□□□ -0.95
PDPN-210ENST00000513143 C19orf71A6NCJ1 209 aa9.11□□□□□ -0.95
PDPN-210ENST00000513143 SH2D1AO60880 128 aa9.11□□□□□ -0.95
PDPN-210ENST00000513143 DEFA6Q01524 100 aa9.11□□□□□ -0.95
PDPN-210ENST00000513143 PNRC1Q12796 327 aaPredicted RBP9.11□□□□□ -0.95
PDPN-210ENST00000513143 PRR27Q6MZM9 219 aa9.11□□□□□ -0.95
PDPN-210ENST00000513143 TMEM256Q8N2U0 113 aa9.11□□□□□ -0.95
PDPN-210ENST00000513143 H7BYZ3 331 aa9.1□□□□□ -0.95
PDPN-210ENST00000513143 ADIRFQ15847 76 aa9.1□□□□□ -0.95
PDPN-210ENST00000513143 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
PDPN-210ENST00000513143 ZNF705AQ6ZN79 300 aaPredicted RBP9.1□□□□□ -0.95
PDPN-210ENST00000513143 ISOC2Q96AB3 205 aa9.1□□□□□ -0.95
PDPN-210ENST00000513143 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
PDPN-210ENST00000513143 GOLT1BQ9Y3E0 138 aa9.1□□□□□ -0.95
PDPN-210ENST00000513143 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 NUDT10Q8NFP7 164 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 RNF183Q96D59 192 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 DAZAP1Q96EP5 407 aaKnown RBP9.09□□□□□ -0.95
PDPN-210ENST00000513143 NUDT11Q96G61 164 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 RCHY1Q96PM5 261 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 LINC01587Q99440 93 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 PYGO2Q9BRQ0 406 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 LINC00467Q9BRT7 94 aa9.09□□□□□ -0.95
PDPN-210ENST00000513143 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 TDRG1Q3Y452 100 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 ANXA2RQ3ZCQ2 193 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 TMEM208Q9BTX3 173 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 RNASE7Q9H1E1 156 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms