RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 FOXA3P55318 350 aaPredicted RBP7.32□□□□□ -1.24
MSH3-203ENST00000512531 SLC35B1P78383 322 aa7.32□□□□□ -1.24
MSH3-203ENST00000512531 KLF5Q13887 457 aaPredicted RBP7.32□□□□□ -1.24
MSH3-203ENST00000512531 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
MSH3-203ENST00000512531 PGLYRP4Q96LB8 373 aa7.32□□□□□ -1.24
MSH3-203ENST00000512531 ASCL2Q99929 193 aa7.32□□□□□ -1.24
MSH3-203ENST00000512531 PRDM13Q9H4Q3 707 aa7.32□□□□□ -1.24
MSH3-203ENST00000512531 NAGKQ9UJ70 344 aa7.32□□□□□ -1.24
MSH3-203ENST00000512531 S4R3C0 116 aa7.32□□□□□ -1.24
MSH3-203ENST00000512531 ARHGAP32A7KAX9 2087 aa7.32□□□□□ -1.24
MSH3-203ENST00000512531 VWFP04275 2813 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 C20orf202A1L168 122 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 GRIFINA4D1Z8 144 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 H3BUX3 64 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 BUB3O43684 328 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 CA1P00915 261 aaPredicted RBP7.31□□□□□ -1.24
MSH3-203ENST00000512531 GZMBP10144 247 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 TMEM78Q5T7P6 136 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 BRD3OSQ6XYD6 125 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 SMIM15Q7Z3B0 74 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 COX8CQ7Z4L0 72 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 TMEM219Q86XT9 240 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 SGK494Q96LW2 274 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 NOTCH1P46531 2555 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 WNK1Q9H4A3 2382 aa7.31□□□□□ -1.24
MSH3-203ENST00000512531 IGHV3OR16-10A0A075B7F0 116 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 A0A1B0GXF2 115 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 FABP5P3A8MUU1 101 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 F2Z2F3 143 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 G3V318 75 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 ZNF324O75467 553 aaPredicted RBP7.3□□□□□ -1.24
MSH3-203ENST00000512531 OR5AL1P0C617 328 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 FAM106AQ4KMX7 169 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
MSH3-203ENST00000512531 LCN12Q6JVE5 192 aa7.3□□□□□ -1.24
MSH3-203ENST00000512531 PRKDCP78527 4128 aaKnown RBP7.29□□□□□ -1.24
MSH3-203ENST00000512531 TRAV8-1A0A0A6YYK1 113 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 SH2D7A6NKC9 451 aaPredicted RBP7.29□□□□□ -1.24
MSH3-203ENST00000512531 OVOL1O14753 267 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 IGLV2-11P01706 119 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 GPX1P07203 203 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 IGHV4-38-2P0DP08 117 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 ID1P41134 155 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 HIST1H1AQ02539 215 aaPredicted RBP7.29□□□□□ -1.24
MSH3-203ENST00000512531 PMCHL1Q16048 86 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 LY6EQ16553 131 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 GAGE13Q4V321 117 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 C16orf54Q6UWD8 224 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 TCF24Q7RTU0 167 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 TMEM256Q8N2U0 113 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 TMEM86BQ8N661 226 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 KLHDC1Q8N7A1 406 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 ZC2HC1AQ96GY0 325 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 PRR25Q96S07 402 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 LENEPQ9Y5L5 61 aa7.29□□□□□ -1.24
MSH3-203ENST00000512531 M0R2Z0 102 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 NDUFA7O95182 113 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 DDTP30046 118 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 SLAQ13239 276 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 RNASEKQ6P5S7 137 aaKnown RBP7.28□□□□□ -1.24
MSH3-203ENST00000512531 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 OR10J6PQ8NGY7 276 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 C18orf32Q8TCD1 76 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 C17orf77Q96MU5 243 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 ALKBH7Q9BT30 221 aaPredicted RBP7.28□□□□□ -1.24
MSH3-203ENST00000512531 VAMP8Q9BV40 100 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 NPFFR1Q9GZQ6 430 aa7.28□□□□□ -1.24
MSH3-203ENST00000512531 LOC102724200A0A096LPH7 203 aaPredicted RBP7.27□□□□□ -1.25
MSH3-203ENST00000512531 K7EMT4 169 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 M0QZ24 198 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 M0R3E3 92 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 SH2D1AO60880 128 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 ZNF138P52744 262 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 KRTDAPP60985 99 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 FER1L6-AS1Q8NA97 138 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 GTSF1Q8WW33 167 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 LINC00477Q96M19 166 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 CITED1Q99966 193 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 TPPP3Q9BW30 176 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 NRN1Q9NPD7 142 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 HSPB8Q9UJY1 196 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 UFC1Q9Y3C8 167 aa7.27□□□□□ -1.25
MSH3-203ENST00000512531 IGKV2-40A0A087WW87 121 aaPredicted RBP7.26□□□□□ -1.25
MSH3-203ENST00000512531 IGKV2D-40P01614 121 aaPredicted RBP7.26□□□□□ -1.25
MSH3-203ENST00000512531 ORM1P02763 201 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 PPBPP02775 128 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 NTF3P20783 257 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 FOXE3Q13461 319 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 FBLN7Q53RD9 439 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 CFAP161Q6P656 301 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 MRPL52Q86TS9 123 aaKnown RBP7.26□□□□□ -1.25
MSH3-203ENST00000512531 OR4X2Q8NGF9 303 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 PIFOQ8TCI5 191 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 DUX5Q96PT3 197 aa7.26□□□□□ -1.25
MSH3-203ENST00000512531 FAM30AQ9NZY2 134 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms